RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 RERGQ96A58 199 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 SNX27Q96L92 541 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 PANX3Q96QZ0 392 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ACOX2Q99424 681 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 MIEF1Q9NQG6 463 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 SNX8Q9Y5X2 465 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 JAG1P78504 1218 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 MAGEC3Q8TD91 643 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 FCRL2Q96LA5 508 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 SALL3Q9BXA9 1300 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 USP12O75317 370 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 PAGE1O75459 146 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ABCG1P45844 678 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 INAVAQ3KP66 663 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 LDLRAD1Q5T700 205 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ANO7Q6IWH7 933 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 CHMP1BQ7LBR1 199 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 IKZF4Q9H2S9 585 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 FAM96AQ9H5X1 160 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ZBTB14O43829 449 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 FKBP9O95302 570 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 FNTAP49354 379 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 GALNT3Q14435 633 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 AMZ1Q400G9 498 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 FKBP9P1Q75LS8 142 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 METTL3Q86U44 580 aaKnown RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 HID1Q8IV36 788 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 GPR135Q8IZ08 494 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 INPP5DQ92835 1189 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 SEMA3CQ99985 751 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 C17orf80Q9BSJ5 609 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ELOVL6Q9H5J4 265 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 PHPT1Q9NRX4 125 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 TEKT2Q9UIF3 430 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 TMEM120BA0PK00 339 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ANXA5P08758 320 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 TEAD2Q15562 447 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 ECM1Q16610 540 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 SLC35C1Q96A29 364 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 ZNF862O60290 1169 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 GTF2E2P29084 291 aaKnown RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 ARL2P36404 184 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 BMPR2Q13873 1038 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 CYP20A1Q6UW02 462 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 DACH2Q96NX9 599 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ERVW-1Q9UQF0 538 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 SLC27A6Q9Y2P4 619 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 F8W810 466 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 PGM1P36871 562 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 SERPINB5P36952 375 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 PRIM2P49643 509 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 MCL1Q07820 350 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 CDH17Q12864 832 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 C17orf99Q6UX52 265 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ANKS1BQ7Z6G8 1248 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 CYGBQ8WWM9 190 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 SYTL2Q9HCH5 934 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 PPIEQ9UNP9 301 aaKnown RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 SMNDC1O75940 238 aaKnown RBP eCLIP13.97□□□□□ -0.17
SIX4-201ENST00000216513 IQCF3P0C7M6 154 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 UBTFL6P0CB48 400 aaPredicted RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 AKT2P31751 481 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 SLC11A1P49279 550 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 FAAH2Q6GMR7 532 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 SAE1Q9UBE0 346 aaPredicted RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 VIPP01282 170 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 CCNG1P51959 295 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ABCE1P61221 599 aaKnown RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 LPAL2Q16609 132 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 SPATA21Q7Z572 469 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ERP27Q96DN0 273 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 RPL10LQ96L21 214 aaKnown RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 CNGB3Q9NQW8 809 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 CRYL1Q9Y2S2 319 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ZFP37Q9Y6Q3 630 aaPredicted RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 TIMP1P01033 207 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ALAS2P22557 587 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ZC3H12BQ5HYM0 836 aaKnown RBP13.97□□□□□ -0.17
SIX4-201ENST00000216513 PARP9Q8IXQ6 854 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 FAM111AQ96PZ2 611 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 TMEM175Q9BSA9 504 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 TRPC4Q9UBN4 977 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 YIPF1Q9Y548 306 aa13.97□□□□□ -0.17
SIX4-201ENST00000216513 ROBO3Q96MS0 1386 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 DNAJC8O75937 253 aaPredicted RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 SNRPAP09012 282 aaKnown RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 SLC9A5Q14940 896 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 TPGS2Q68CL5 300 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 KLHL35Q6PF15 583 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 DIS3LQ8TF46 1054 aaKnown RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 PCED1BQ96HM7 432 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 DPEP3Q9H4B8 488 aa13.96□□□□□ -0.17
SIX4-201ENST00000216513 PSMC3IPQ9P2W1 217 aaPredicted RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 EVLQ9UI08 416 aaPredicted RBP13.96□□□□□ -0.17
SIX4-201ENST00000216513 ATP8B1O43520 1251 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms