RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 T-ENOLP0DO92 83 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 NMBRP28336 390 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TYK2P29597 1187 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MNAT1P51948 309 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 EFEMP1Q12805 493 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ATG16L1Q676U5 607 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 NAPEPLDQ6IQ20 393 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 KCNMB4Q86W47 210 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ARID3BQ8IVW6 561 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 PXYLP1Q8TE99 480 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ATP2A3Q93084 1043 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 PRR11Q96HE9 360 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 RBBP8Q99708 897 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 C20orf96Q9NUD7 363 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 SYN3O14994 580 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TGDSO95455 350 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ATP6V1G2O95670 118 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 HLA-DQB2P05538 268 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 CPB1P15086 417 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 SELPP16109 830 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 KCNA4P22459 653 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 RPL10AP62906 217 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ZNF33AQ06730 810 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 PSMD5Q16401 504 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 FASTKD1Q53R41 847 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TEDDM1Q5T9Z0 273 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 KYAT3Q6YP21 454 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 KDELC2Q7Z4H8 507 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MIB1Q86YT6 1006 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 DCLK2Q8N568 766 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ACMSDQ8TDX5 336 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 C8orf48Q96LL4 319 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TSGA13Q96PP4 275 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 FBXO44Q9H4M3 255 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 CAB39LQ9H9S4 337 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 SNX15Q9NRS6 342 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ZNF358Q9NW07 568 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 PCDHB7Q9Y5E2 793 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 GSRP00390 522 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TBX4P57082 545 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 OCRLQ01968 901 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ZBTB16Q05516 673 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 POU6F1Q14863 301 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 GPNMBQ14956 572 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 GRTP1Q5TC63 336 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 FSTL4Q6MZW2 842 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ZNF280DQ6N043 979 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 LZTR1Q8N653 840 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 RTL3Q8N8U3 475 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 PPP1R14CQ8TAE6 165 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 C7orf26Q96N11 449 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 SEPT5Q99719 369 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 CRISPLD1Q9H336 500 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 IARS2Q9NSE4 1012 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 SOX13Q9UN79 622 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 AAR2Q9Y312 384 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MIA3Q5JRA6 1907 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 SCN5AQ14524 2016 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 GREB1Q4ZG55 1949 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ENPP3O14638 875 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MATN3O15232 486 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 IL1BP01584 269 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 NPY2RP49146 381 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 NUMBP49757 651 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 PAPOLAP51003 745 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 LIMK2P53671 638 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MLLT6P55198 1093 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 DLG2Q15700 870 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 CTC1Q2NKJ3 1217 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MGAT5BQ3V5L5 792 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TTC7BQ86TV6 843 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 FBXO32Q969P5 355 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 IL12RB2Q99665 862 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TBL1YQ9BQ87 522 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 ATXN3LQ9H3M9 355 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 GLOD4Q9HC38 313 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 RBM22Q9NW64 420 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 MARCH5Q9NX47 278 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 TMEM216Q9P0N5 145 aa8.13□□□□□ -1.11
HMGXB4-201ENST00000216106 BIRC5O15392 142 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 CACNG3O60359 315 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 PLIN3O60664 434 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 PMPCBO75439 489 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 NEBLO76041 1014 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 HMBSP08397 361 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 HTR7P34969 479 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 SPRP35270 261 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 RSPO2Q6UXX9 243 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 LINC00523Q86TU6 105 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 ALYREFQ86V81 257 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 TMEM173Q86WV6 379 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 SUGP1Q8IWZ8 645 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 SKA1Q96BD8 255 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 SLC39A13Q96H72 371 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 CASD1Q96PB1 797 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 FICDQ9BVA6 458 aa8.12□□□□□ -1.11
HMGXB4-201ENST00000216106 LRMDAQ9H2I8 198 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms