RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Itga11P61622 1188 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 CkbQ04447 381 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 4930430A15RikQ05AC5 485 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Mrgprb1Q3UG61 350 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 E330034G19RikQ3UWX6 351 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 ScinQ60604 715 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Olfr867Q7TRF3 331 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Olfr20Q7TRX9 314 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Ahcyl1Q80SW1 530 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Usp6nlQ80XC3 819 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Pggt1bQ8BUY9 377 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Serpina3nQ91WP6 418 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Rec114Q9CWH4 259 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 LrgukQ9D5S7 820 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Sun1Q9D666 913 aaKnown RBP13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Eif4e3Q9DBB5 207 aa13.48□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 UmpsP13439 481 aaKnown RBP13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Cd19P25918 547 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Tbxas1P36423 533 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Krt80Q0VBK2 452 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Als2clQ60I26 952 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Wee2Q66JT0 555 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Zbtb33Q8BN78 671 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Spdye4bQ8CDE8 236 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 LipmQ8K2A6 422 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Nsl1Q8K305 281 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 TgdsQ8VDR7 355 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Mrps2Q924T2 291 aaKnown RBP13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Pin4Q9CWW6 131 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 PtsQ9R1Z7 144 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Rps6kb2Q9Z1M4 485 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Erich1E9PY43 332 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Scamp3O35609 349 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Sat1P48026 171 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Fam131bQ3TY60 332 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Adrbk2Q3UYH7 688 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Tmem209Q8BRG8 561 aaKnown RBP13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 ItchQ8C863 864 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Nol6Q8R5K4 1152 aaKnown RBP13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Itm2cQ91VK4 269 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Med21Q9CQ39 144 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Kbtbd12Q9D618 625 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Q9D937 123 aaKnown RBP13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Bnc1O35914 961 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Top3aO70157 1003 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 PolP11369 1281 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Rab17P35292 214 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Ptger1P35375 405 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Frg1P97376 258 aaKnown RBP13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Mxd4Q60948 209 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Nfe2l1Q61985 741 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Far2Q7TNT2 515 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Catsper3Q80W99 395 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Aoc2Q812C9 757 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 AgpsQ8C0I1 645 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Kctd12bQ8C7J6 292 aa13.47□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Col11a2Q64739 1736 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Pcdh7A0A0A6YY83 1255 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 XntrpcF8VQM8 1264 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Pgk1P09411 417 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Wdr36Q3TAQ9 899 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 4932411N23RikQ8C0S0 470 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Rnf31Q924T7 1066 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Ttc30a1Q99J38 664 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Rrp15Q9CYX7 281 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Lrrc46Q9DAP0 323 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Ccdc86Q9JJ89 426 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Cntn6Q9JMB8 1028 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 C1qtnf1Q9QXP7 281 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Arfgef1G3X9K3 1846 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Zfp831A2ADM8 1628 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Arhgef37A1IGU4 676 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Kiaa1522A2A7S8 1013 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Cylc2B1AWN8 422 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Stx7O70439 261 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Gdf6P43028 454 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Smpdl3bP58242 456 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 YwhaqP68254 245 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Akr1c6P70694 323 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Plcl1Q3USB7 1096 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Phlda1Q62392 405 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Wasf2Q8BH43 497 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Fbxo38Q8BMI0 1194 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Glis1Q8K1M4 789 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Sh3kbp1Q8R550 709 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Cadm1Q8R5M8 456 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Fip1l1Q9D824 581 aaKnown RBP13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 P2yr13Q9D8I2 337 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Fads3Q9JJE7 449 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 Cyb561d2Q9WUE3 222 aa13.46□□□□□ -0.25
Pdgfra-205ENSMUST00000201711 F6Y6L6 278 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Abhd12bG3UZN6 359 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 BpgmP15327 259 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 RxrbP28704 520 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Traf2P39429 501 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Sh3bp2Q06649 559 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Dnajc1Q61712 552 aaKnown RBP13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Cep290Q6A078 2472 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Dnajc6Q80TZ3 938 aa13.46□□□□□ -0.26
Pdgfra-205ENSMUST00000201711 Aste1Q8BIR2 672 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms