RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Asz1Q8VD46 475 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 DdoQ922Z0 341 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Gprc5bQ923Z0 410 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Rwdd4Q9CPR1 188 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Scnn1bQ9WU38 638 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Sh2d4bA6X942 431 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Cdh18E9Q9Q6 790 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Vps4bP46467 444 aaKnown RBP26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 VdrP48281 422 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 CidecP56198 239 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Krt80Q0VBK2 452 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Samd11Q1RNF8 542 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Sult1d1Q3UZZ6 295 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Rbm12b1Q80YR9 836 aaKnown RBP26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Klhl38Q8BSF5 581 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Rsph1Q8VIG3 301 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Commd8Q9CZG3 183 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Efcab9Q9DAM2 216 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 ApipQ9WVQ5 241 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Cacna2d3Q9Z1L5 1091 aa26.3■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Scn8aQ9WTU3 1978 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Aldoart1A6ZI46 419 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Sap25Q1EHW4 186 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Fzd6Q61089 709 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Spa17Q62252 149 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ripor1Q68FE6 1223 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Spata24Q6P926 205 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ccnt2Q7TQK0 723 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Olfr533Q7TRT7 320 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Proser2Q8C5R2 471 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Cabs1Q8C633 391 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Setd7Q8VHL1 366 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 MkksQ9JI70 570 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Prmt1Q9JIF0 371 aa26.29■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Zbtb11G5E8B9 1050 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Srpk1O70551 648 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Myl4P09541 193 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Asgr1P34927 284 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Wdr5P61965 334 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Entpd7Q3TCT4 606 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ccdc110Q3V125 848 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Lcp1Q61233 627 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Gm5414Q6IFZ8 552 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ano4Q8C5H1 955 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Pnpt1Q8K1R3 783 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 LipmQ8K2A6 422 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ipo11Q8K2V6 975 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Tfap2dQ91ZK0 452 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Spg21Q9CQC8 308 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 GatmQ9D964 423 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Actn2Q9JI91 894 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Gkap1Q9JMB0 366 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Tp53bp1P70399 1969 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Gm7942L7N277 499 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Exoc7O35250 697 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 CrymO54983 313 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Gsta4P24472 222 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Il12bP43432 335 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Smpdl3aP70158 445 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Epas1P97481 874 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Uba1Q02053 1058 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Maml1Q6T264 1020 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Phf8Q80TJ7 1023 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Cplx4Q80WM3 160 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ticam2Q8BJQ4 232 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Pdcd2lQ8C5N5 364 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Msi2Q920Q6 346 aaKnown RBP26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Acot13Q9CQR4 140 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Fam227bQ9D518 532 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ovca2Q9D7E3 225 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 1700109H08RikQ9D9C0 210 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 PllpQ9DCU2 182 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 C1qtnf1Q9QXP7 281 aa26.28■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Vmn2r104E9Q2J5 860 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Gm45837F7D3W5 961 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Chrna4O70174 629 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 TertO70372 1122 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 P01641 117 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Cyp17a1P27786 507 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Aff3P51827 1254 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Ptprn2P80560 1001 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Chsy1Q6ZQ11 800 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Tdpoz3Q717B4 365 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Rbm22Q8BHS3 420 aaKnown RBP26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Alg9Q8VDI9 611 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 PgcQ9D7R7 392 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Krt7Q9DCV7 457 aa26.27■■□□□ 1.8
Tpm1-216ENSMUST00000113707 Zfp963D3Z2T8 383 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Crabp2P22935 138 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Nudt1P53368 156 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cntn3Q07409 1028 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ankrd6Q69ZU8 712 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Vtcn1Q7TSP5 283 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Als2cr12Q8BVM7 383 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ccdc71Q8VEG0 433 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Stk33Q924X7 491 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tpd52l2Q9CYZ2 220 aaKnown RBP26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cpxm2Q9D2L5 764 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Slc39a5Q9D856 535 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tm9sf1Q9DBU0 606 aa26.26■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms