RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 AladP10518 330 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Lamp2P17047 415 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Kpna2P52293 529 aaKnown RBP13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ndst1Q3UHN9 882 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Snx21Q3UR97 363 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Plcl1Q3USB7 1096 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Senp5Q6NXL6 749 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Serpina12Q7TMF5 413 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Kirrel2Q7TSU7 700 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Msantd1Q8BIL2 278 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Kansl2Q8BQR4 486 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Osbpl6Q8BXR9 959 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Anapc2Q8BZQ7 837 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ddx18Q8K363 660 aaKnown RBP13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Vmn1r213Q8R278 384 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rps6kl1Q8R2S1 544 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 ClmpQ8R373 373 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zfp566Q8VCI1 386 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pcdha6Q91Y14 946 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ctu1Q99J10 420 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mtfr1Q99MB2 328 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tbc1d21Q9D9D3 336 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ppp2r3cQ9JK24 453 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ap1m2Q9WVP1 423 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gria4Q9Z2W8 902 aa13.15□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pcna-ps2A0A140T8V5 261 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm281D3Z1Y0 860 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Vmn2r44L7N2E1 861 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Adam19O35674 920 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Trdmt1O55055 415 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 PcnaP17918 261 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 LynP25911 512 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 PpargP37238 505 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Polr1bP70700 1135 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tmprss15P97435 1069 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 B3gntl1Q3U129 357 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Agap2Q3UHD9 1186 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Etaa1Q5SVT3 877 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ndrg1Q62433 394 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Klhl14Q69ZK5 630 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Atp2c1Q80XR2 918 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tmem260Q8BMD6 703 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ccdc184Q8BMK5 191 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cog4Q8R1U1 785 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cys1Q8R4T1 145 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Il20Q9JKV9 176 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Abt1Q9QYL7 269 aaKnown RBP13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Grm3Q9QYS2 879 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mtmr7Q9Z2C9 660 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mpp1P70290 466 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Arhgap17Q3UIA2 846 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Thrap3Q569Z6 951 aaKnown RBP13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Nlrp9cQ66X01 1004 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Znf512Q69Z99 562 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 N4bp1Q6A037 893 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tmem151aQ6GQT5 468 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Abcg2Q7TMS5 657 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfr212Q7TS33 327 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Best2Q8BGM5 508 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Prkaa2Q8BRK8 552 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cabcoco1Q8CDT7 208 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Vps11Q91W86 941 aaKnown RBP13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pcdhb13Q91Y06 796 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Vps28Q9D1C8 221 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Lrrc46Q9DAP0 323 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cdkl2Q9QUK0 568 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Nme7Q9QXL8 395 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 VapbQ9QY76 243 aaKnown RBP13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Abhd1Q9QZC8 412 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 CdylQ9WTK2 593 aa13.14□□□□□ -0.31
Nup88-203ENSMUST00000108531 Akap5D3YVF0 745 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Erich2E9Q1A6 463 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Csrp3P50462 194 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gpr174Q3U507 335 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Zbtb8osQ505B7 168 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pla2g4dQ50L43 825 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Trpv1Q704Y3 839 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Arrdc3Q7TPQ9 414 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfr1105Q7TR58 312 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Zdhhc19Q810M5 347 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 4933402J07RikQ8BHX0 270 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Zcchc4Q8BKW4 512 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gjd4Q8BSD4 364 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cndp1Q8BUG2 492 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 TbcdQ8BYA0 1196 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Atg14Q8CDJ3 492 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Adprhl2Q8CG72 370 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Snapc1Q8K0S9 389 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pth2rQ91V95 546 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Lypd3Q91YK8 363 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gprc5bQ923Z0 410 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Reep3Q99KK1 254 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 DenrQ9CQJ6 198 aaKnown RBP13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Acot13Q9CQR4 140 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Znf687Q9D2D7 1237 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 CasrQ9QY96 1079 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pex11bQ9Z210 259 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm3173A6NAS3 172 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pdia2D3Z6P0 527 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm3020E9Q3J7 150 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms