RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rad9aQ9Z0F6 389 aa23.39■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Nhsl2B1AXH1 854 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 March10E9PX79 788 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Vmn2r88L7N1W8 857 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Usp35M0QWN7 1009 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 CalrP14211 416 aaKnown RBP23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Psma2P49722 234 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Q32P12 615 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Fzd6Q61089 709 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Dnajb13Q80Y75 316 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 4933402J07RikQ8BHX0 270 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Asb14Q8C6Y6 587 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tbc1d14Q8CGA2 694 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Lmcd1Q8VEE1 365 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PlvapQ91VC4 438 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Bzw1Q9CQC6 419 aaKnown RBP23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PrccQ9EQC8 491 aaKnown RBP23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Snx1Q9WV80 522 aa23.38■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Zfp626A0A0U1RQ84 676 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Zfp985A2A7A5 519 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 DcxO88809 366 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Oprl1P35377 367 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pyroxd1Q3TMV7 498 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ofcc1Q8BGX4 166 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Dclre1bQ8C7W7 541 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Abcf3Q8K268 709 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Mfsd5Q921Y4 450 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 NonoQ99K48 473 aaKnown RBP23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tlr9Q9EQU3 1032 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 4930444G20RikD3Z741 495 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Zfp212G3X8R7 492 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Capn6O35646 641 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Banf1O54962 89 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PolgP54099 1218 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 GmncQ3URY2 333 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 CpQ61147 1061 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Lag3Q61790 521 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ccdc154Q6RUT8 657 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Chsy1Q6ZQ11 800 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Robo4Q8C310 1012 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Lancl3Q8CD19 420 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ints9Q8K114 658 aaKnown RBP23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Aco2Q99KI0 780 aaKnown RBP23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Atp11cQ9QZW0 1129 aa23.37■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Upp1P52624 311 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Acot8P58137 320 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tmem120bQ3TA38 339 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 AcrbpQ3V140 540 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Zswim5Q80TC6 1188 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Baiap2l2Q80Y61 522 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Kremen2Q8K1S7 461 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Rprd1aQ8VDS4 312 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ndufb5Q9CQH3 189 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pld1Q9Z280 1074 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Kat6aQ8BZ21 2003 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Hsd17b7O88736 334 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Coro1aO89053 461 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Npas2P97460 816 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Trappc9Q3U0M1 1148 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Srbd1Q497V5 1015 aaKnown RBP23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Bdkrb1Q61125 334 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Got1l1Q7TSV6 404 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Plekhs1Q8BW88 474 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Itpk1Q8BYN3 419 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pde10aQ8CA95 790 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Nlrp10Q8CCN1 673 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Slc36a1Q8K4D3 475 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Cpt1bQ924X2 772 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Cdkn2aipnlQ9D211 116 aaKnown RBP23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Polr3cQ9D483 533 aa23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ccdc124Q9D8X2 217 aaKnown RBP23.36■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Slfn8B1ARD8 910 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Snx3O70492 162 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Aff1O88573 1216 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PorP37040 678 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 E2f2P56931 443 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Neurog1P70660 244 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pih1d3Q3KNI6 218 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Zyg11bQ3UFS0 744 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Rbl2Q64700 1135 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Sp140Q6NSQ5 534 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tdpoz3Q717B4 365 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ppp1r15bQ8BFW3 697 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pak5Q8C015 719 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Cwf19l1Q8CI33 537 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 NcaldQ91X97 193 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Dlg2Q91XM9 852 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pcdhb3Q91XZ7 784 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pde6cQ91ZQ1 861 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Cdk9Q99J95 372 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Golga1Q9CW79 758 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Arl2Q9D0J4 184 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pard6bQ9JK83 371 aa23.35■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Fam155bA2BDP1 471 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Dthd1E9PZX1 795 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Abhd12bG3UZN6 359 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 RnaselQ05921 735 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Pecam1Q08481 727 aaKnown RBP23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Six4Q61321 775 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Mpp7Q8BVD5 576 aa23.34■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms