RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Lrrc8aQ80WG5 810 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Slc7a4Q8BLQ7 635 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Daam1Q8BPM0 1077 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Sept10Q8C650 452 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm6367Q8C6L9 287 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fam161aQ8QZV6 448 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cdkn2aipnlQ9D211 116 aaKnown RBP11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Efhc2Q9D485 750 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 PdiltQ9DAN1 588 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Capn12Q9ER56 720 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ddx24Q9ESV0 857 aaKnown RBP11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Hacl1Q9QXE0 581 aa11.64□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Plce1Q8K4S1 2282 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pi4kaE9Q3L2 2105 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 F8Q06194 2319 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Btbd18A0A0A6YY25 723 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm28729A0A1B0GSW2 409 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 A0A286YCD0 109 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 TomtA1Y9I9 258 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zbtb34A2ATY4 518 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr742A2RTP5 311 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zc3h12bG3X9I7 835 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 MttpO08601 894 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Wisp1O54775 367 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gdap1O88741 358 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ltb4rO88855 351 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 PolP11369 1281 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cd44P15379 778 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cyr61P18406 379 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Klra1P20937 262 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Glb1P23780 647 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Slc6a13P31649 602 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pdcd1Q02242 288 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Eml1Q05BC3 814 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 NfkbidQ2TB02 327 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Qsox2Q3TMX7 692 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zmym5Q3U2E2 627 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Lamb3Q61087 1168 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Itga7Q61738 1179 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Dpysl3Q62188 570 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tpp2Q64514 1262 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Q66JV7 365 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 ManeaQ6NXH2 462 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Znf728Q6P5C7 752 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tra2aQ6PFR5 281 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Wfikkn2Q7TQN3 571 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zmpste24Q80W54 475 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mis18bp1Q80WQ8 998 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ddrgk1Q80WW9 315 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Q8BHN7 327 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm6377Q8BHV4 303 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zfp719Q8BIV1 735 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mei4Q8BRM6 389 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Proser2Q8C5R2 471 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gatad2aQ8CHY6 629 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 TmieQ8K467 153 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cadm1Q8R5M8 456 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Wdr74Q8VCG3 384 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Caap1Q8VDY9 356 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Caskin2Q8VHK1 1201 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gprc5bQ923Z0 410 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Eps8l2Q99K30 729 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Lsm7Q9CQQ8 103 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Creld2Q9CYA0 350 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cfap57Q9D180 1249 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mrps33Q9D2R8 106 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ankrd7Q9D504 279 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fam227bQ9D518 532 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 SrpraQ9DBG7 636 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tlr9Q9EQU3 1032 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Il1rl2Q9ERS7 574 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cwc15Q9JHS9 229 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Rpf2Q9JJ80 306 aaKnown RBP11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pcsk1nQ9QXV0 258 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pcm1Q9R0L6 2025 aa11.63□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Adam34A2RSG8 714 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm3542K7N6U2 270 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pja1O55176 578 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Myo1aO88329 1043 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cdh1P09803 884 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ctla2bP12400 113 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tap1P21958 724 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Lefty2P57785 368 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Npy2rP97295 381 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cd80Q00609 306 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Nhej1Q3KNJ2 295 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cul4aQ3TCH7 759 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 9130409I23RikQ3TS87 320 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Prickle1Q3U5C7 832 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Wdr41Q3UDP0 460 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gcnt3Q5JCT0 437 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fbxw2Q60584 422 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Klra5Q60652 266 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tnfaip2Q61333 691 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ablim3Q69ZX8 682 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ssxb10Q6XAR7 170 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Syt14Q7TN84 555 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Rxfp4Q7TQP4 414 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Haus1Q8BHX1 278 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Znf775Q8BI73 538 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms