RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 OTUB2Q96DC9 234 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 MAGEB18Q96M61 343 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TRIM45Q9H8W5 580 aaPredicted RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 CLDND1Q9NY35 253 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 ADAMTS1Q9UHI8 967 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 COL11A1P12107 1806 aaPredicted RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 ESYT3A0FGR9 886 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TTLL13PA6NNM8 815 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 NOTOA8MTQ0 251 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 COPEO14579 308 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 GNB5O14775 395 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 KLHL2O95198 593 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 BCL10O95999 233 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TARSP26639 723 aaKnown RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 CHN2P52757 468 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 GEMIN4P57678 1058 aaKnown RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 IL1RL1Q01638 556 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 INPP5AQ14642 412 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 NCAPHQ15003 741 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 PTPN21Q16825 1174 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 LRRC36Q1X8D7 754 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TRMT5Q32P41 509 aaKnown RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 SLC8B1Q6J4K2 584 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 ACAD11Q709F0 780 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 GLYCTKQ8IVS8 523 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 FAM71AQ8IYT1 594 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 NDUFAF2Q8N183 169 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 OR9Q1Q8NGQ5 310 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 SLC2A14Q8TDB8 520 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 PI4K2AQ9BTU6 479 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 CCDC90BQ9GZT6 254 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TRIM39Q9HCM9 518 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 HMG20AQ9NP66 347 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TBCCD1Q9NVR7 557 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 SELENONQ9NZV5 590 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TSPAN16Q9UKR8 245 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 GPC6Q9Y625 555 aaPredicted RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 LRRC53A6NM62 1247 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 FOXN3O00409 490 aaPredicted RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 PFDN6O15212 129 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TBC1D4O60343 1298 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 ZBED1O96006 694 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 CYP11B1P15538 503 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 BMP6P22004 513 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 MNX1P50219 401 aaPredicted RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 YWHAZP63104 245 aaKnown RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 KLHL12Q53G59 568 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 C10orf120Q5SQS8 335 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 ZNF354CQ86Y25 554 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 ZNF555Q8NEP9 628 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 SPPL3Q8TCT6 385 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 TBCBQ99426 244 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 WDR6Q9NNW5 1121 aaKnown RBP5.8□□□□□ -1.48
RTTN-218ENST00000640408 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.8□□□□□ -1.48
RTTN-218ENST00000640408 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.8□□□□□ -1.48
RTTN-218ENST00000640408 CROTQ9UKG9 612 aa5.8□□□□□ -1.48
RTTN-218ENST00000640408 MFN2O95140 757 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 FGGP02679 453 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 VAV1P15498 845 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 VCPP55072 806 aaKnown RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 ROR1Q01973 937 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 SPIDRQ14159 915 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 MAPRE2Q15555 327 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 SLC18A3Q16572 532 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 SDE2Q6IQ49 451 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 ZNF280BQ86YH2 543 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 RIBC1Q8N443 379 aaPredicted RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 NOA1Q8NC60 698 aaKnown RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 CMASQ8NFW8 434 aaPredicted RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 MYLPFQ96A32 169 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 C11orf70Q9BRQ4 267 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 GINS4Q9BRT9 223 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 AVENQ9NQS1 362 aaPredicted RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 CLIC5Q9NZA1 410 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 SPEF1Q9Y4P9 236 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 KRT16P08779 473 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 MBL2P11226 248 aaPredicted RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 CCDC130P13994 396 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 RPL5P46777 297 aaKnown RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 TKTL1P51854 596 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 USP46P62068 366 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 AKAP14Q86UN6 197 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 TTC16Q8NEE8 873 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 CSGALNACT1Q8TDX6 532 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 RFFLQ8WZ73 363 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 ARL8AQ96BM9 186 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 DGCR14Q96DF8 476 aaKnown RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 SHDQ96IW2 340 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 CXXC1Q9P0U4 656 aaPredicted RBP5.79□□□□□ -1.48
RTTN-218ENST00000640408 SNX24Q9Y343 169 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 YIPF1Q9Y548 306 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 B2RBV5 119 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 CSPG5O95196 566 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 LTFP02788 710 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 PDGFRAP16234 1089 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 ZNF12P17014 697 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 HDCP19113 662 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 BDNFP23560 247 aa5.79□□□□□ -1.48
RTTN-218ENST00000640408 IFNA8P32881 189 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms