RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.63
SNIP1-204ENST00000638725 MARK4Q96L34 752 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 NUF2Q9BZD4 464 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 NMRAL1Q9HBL8 299 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 COX16Q9P0S2 106 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 ADAM28Q9UKQ2 775 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 RAB26Q9ULW5 256 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 TK2O00142 265 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 PDLIM1O00151 329 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 SOCS7O14512 581 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 STAU1O95793 577 aaKnown RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 USP46P62068 366 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 CDKL1Q00532 357 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 FAM187BQ17R55 369 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 MYLK3Q32MK0 819 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 HSP90AA5PQ58FG0 334 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 PIGGQ5H8A4 983 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 TICAM1Q8IUC6 712 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 MFSD3Q96ES6 412 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 CATSPER2Q96P56 530 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 PRPF18Q99633 342 aaKnown RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 PKP2Q99959 881 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 NFKBIZQ9BYH8 718 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 RNF19AQ9NV58 838 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 HSFX1Q9UBD0 423 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 FZD10Q9ULW2 581 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 AKT3Q9Y243 479 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 GJA3Q9Y6H8 435 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 AK5Q9Y6K8 562 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF638Q14966 1978 aaKnown RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 MATN2O00339 956 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 GLUD2P49448 558 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 CYLC2Q14093 348 aaPredicted RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 B3GNT6Q6ZMB0 384 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 RNF139Q8WU17 664 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 LENG1Q96BZ8 264 aaPredicted RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 SPATC1LQ9H0A9 340 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 RBM38Q9H0Z9 239 aaKnown RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 LRRC40Q9H9A6 602 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 DDX18Q9NVP1 670 aaKnown RBP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNIP1-204ENST00000638725 TMCO1Q9UM00 188 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 LRRC37A2A6NM11 1700 aa11.14□□□□□ -0.63
SNIP1-204ENST00000638725 ZCWPW2A0A1B0GU75 182 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 HDAC3O15379 428 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 PIGNO95427 931 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 PENKP01210 267 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 INSRRP14616 1297 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 SULT1E1P49888 294 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 SNX16P57768 344 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 SEL1L3Q68CR1 1132 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 DEFB106AQ8N104 65 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ZFP28Q8NHY6 868 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 RP9Q8TA86 221 aaKnown RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 FAM149B1Q96BN6 582 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 CNDP1Q96KN2 507 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 KLHL32Q96NJ5 620 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 MRPS26Q9BYN8 205 aaKnown RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 PREBQ9HCU5 417 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 OXSMQ9NWU1 459 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 KLHL8Q9P2G9 620 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 A0A1B0GTW7 788 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 GOLGA8TH3BQL2 631 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 HNRNPRO43390 633 aaKnown RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 GRID2O43424 1007 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 TNFAIP8O95379 198 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 MPOP05164 745 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 JUNP05412 331 aaKnown RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 TCN1P20061 433 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 SAT1P21673 171 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 PPARGP37231 505 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 BST2Q10589 180 aaKnown RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ARL13AQ5H913 290 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 NXNQ6DKJ4 435 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ZFP1Q6P2D0 407 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 AHI1Q8N157 1196 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 FAM156AQ8NDB6 213 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ADCY4Q8NFM4 1077 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 SREK1Q8WXA9 508 aaKnown RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ACE2Q9BYF1 805 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF696Q9H7X3 374 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 WDR41Q9HAD4 459 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 IGSF9Q9P2J2 1179 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 TUBGCP4Q9UGJ1 667 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 ZDHHC2Q9UIJ5 367 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 CITO14578 2027 aa11.13□□□□□ -0.63
SNIP1-204ENST00000638725 TMCC1O94876 653 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 RPS12P25398 132 aaKnown RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 GRIA4P48058 902 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 GLRBP48167 497 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms