RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TTC31Q49AM3 519 aaPredicted RBP18.92■□□□□ 0.62
CLN6-214ENST00000636314 CXorf57Q6NSI4 855 aaKnown RBP18.92■□□□□ 0.62
CLN6-214ENST00000636314 TRNP1Q6NT89 227 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 C19orf48Q6RUI8 117 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 ARCQ7LC44 396 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 FAM124AQ86V42 546 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 PNPLA1Q8N8W4 532 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 SLC30A5Q8TAD4 765 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 CFAP57Q96MR6 1250 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 NUP58Q9BVL2 599 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 MTG2Q9H4K7 406 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 LAMA5O15230 3695 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.91■□□□□ 0.62
CLN6-214ENST00000636314 SIN3BO75182 1162 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 CLDN11O75508 207 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 GJB3O75712 270 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 MZF1P28698 734 aaPredicted RBP18.91■□□□□ 0.62
CLN6-214ENST00000636314 NNMTP40261 264 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 NUMBP49757 651 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 RPS14P62263 151 aaKnown RBP18.91■□□□□ 0.62
CLN6-214ENST00000636314 SULT2A1Q06520 285 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 ZNF177Q13360 481 aaPredicted RBP18.91■□□□□ 0.62
CLN6-214ENST00000636314 FILIP1LQ4L180 1135 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 C14orf80Q86SX3 495 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 EMC1Q8N766 993 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 CADM4Q8NFZ8 388 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 ADAMTS14Q8WXS8 1223 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 ANLNQ9NQW6 1124 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 ITIH6Q6UXX5 1313 aa18.91■□□□□ 0.62
CLN6-214ENST00000636314 EDDM13A0A1B0GTR0 161 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 TTC34A8MYJ7 566 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 TEX33O43247 280 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 RNASEH1O60930 286 aaKnown RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 CCDC172P0C7W6 258 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 UNGP13051 313 aaPredicted RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 STK19P49842 368 aaPredicted RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 CDH4P55283 916 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 ATP11AP98196 1134 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 ARID5BQ14865 1188 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 CLEC16AQ2KHT3 1053 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 KLHL40Q2TBA0 621 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 ACBD5Q5T8D3 534 aaPredicted RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 LRRC31Q6UY01 552 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 PHLDB2Q86SQ0 1253 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 ZCCHC9Q8N567 271 aaKnown RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 RPL10LQ96L21 214 aaKnown RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 PCDHB18PQ96TA0 734 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 MIR1-1HGQ9H1L0 117 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 RSPH9Q9H1X1 276 aaPredicted RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
CLN6-214ENST00000636314 SNX10Q9Y5X0 201 aa18.9■□□□□ 0.62
CLN6-214ENST00000636314 FASNP49327 2511 aaKnown RBP18.89■□□□□ 0.61
CLN6-214ENST00000636314 A0A1B0GTW7 788 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 I6L893 689 aaPredicted RBP18.89■□□□□ 0.61
CLN6-214ENST00000636314 CAPNS1P04632 268 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 C7P10643 843 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 FERP16591 822 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 SDC4P31431 198 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 PLK1P53350 603 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 CDO1Q16878 200 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 C5orf22Q49AR2 442 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 DCAF12L1Q5VU92 463 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 BNIPLQ7Z465 357 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 FAM131BQ86XD5 332 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 SETD7Q8WTS6 366 aaKnown RBP18.89■□□□□ 0.61
CLN6-214ENST00000636314 FUCA2Q9BTY2 467 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 ZDHHC5Q9C0B5 715 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 PCED1AQ9H1Q7 454 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 CCDC86Q9H6F5 360 aaKnown RBP18.89■□□□□ 0.61
CLN6-214ENST00000636314 TMPRSS4Q9NRS4 437 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 ADAM22Q9P0K1 906 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 SLCO3A1Q9UIG8 710 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 SLC25A13Q9UJS0 675 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 VPS28Q9UK41 221 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 APOBEC2Q9Y235 224 aaKnown RBP18.89■□□□□ 0.61
CLN6-214ENST00000636314 GPSM3Q9Y4H4 160 aa18.89■□□□□ 0.61
CLN6-214ENST00000636314 TMEM131Q92545 1883 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 DOCK4Q8N1I0 1966 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 NUMA1Q14980 2115 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 SYCE3A1L190 88 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 TARSL2A2RTX5 802 aaKnown RBP18.88■□□□□ 0.61
CLN6-214ENST00000636314 CNTN5O94779 1100 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 CALB1P05937 261 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 RHOCP08134 193 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 GSCP56915 257 aaPredicted RBP18.88■□□□□ 0.61
CLN6-214ENST00000636314 PTP4A2Q12974 167 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 ALFQ53S48 1182 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 C9orf64Q5T6V5 341 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 PHF13Q86YI8 300 aaPredicted RBP18.88■□□□□ 0.61
CLN6-214ENST00000636314 OR52K2Q8NGK3 314 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 JOSD2Q8TAC2 188 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 GANCQ8TET4 914 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 RXFP2Q8WXD0 754 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 HAPLN3Q96S86 360 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 AGPAT1Q99943 283 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 FEM1AQ9BSK4 669 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 SELENOOQ9BVL4 669 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 BTBD1Q9H0C5 482 aa18.88■□□□□ 0.61
CLN6-214ENST00000636314 MUC3BQ9H195 1237 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms