RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 MTFMTQ96DP5 389 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TRNT1Q96Q11 434 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 MKNK1Q9BUB5 465 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 MLPHQ9BV36 600 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CCSER1Q9C0I3 900 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM39BQ9GZU3 492 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CATSPERZQ9NTU4 200 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ARL15Q9NXU5 204 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SYNPO2Q9UMS6 1093 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PCDHGB5Q9Y5G0 923 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 NOX1Q9Y5S8 564 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 BAZ2BQ9UIF8 2168 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PTPRTO14522 1441 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM120BA0PK00 339 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 IFNGP01579 166 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 IL1BP01584 269 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CATP04040 527 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FAUP35544 74 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 MTTPP55157 894 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 NFIXQ14938 502 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 AGKQ53H12 422 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FBXO47Q5MNV8 452 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FAXCQ5TGI0 409 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PRAMEF18Q5VWM3 479 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CCDC80Q76M96 950 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ZSCAN1Q8NBB4 408 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ZDHHC15Q96MV8 337 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CPA4Q9UI42 421 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SNX12Q9UMY4 172 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 NDUFAF1Q9Y375 327 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 A0A087X1B8 175 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ABHD14A-ACY1A0A1B0GW23 586 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SSU72P8A0A1W2PR75 194 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FAM92AA1XBS5 289 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 BCL10O95999 233 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ACADSP16219 412 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ITPKBP27987 946 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PDHA2P29803 388 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TUBP50607 506 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 DMPKQ09013 629 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 BMT2Q1RMZ1 405 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 LGI2Q8N0V4 545 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 HDDC3Q8N4P3 179 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 OXER1Q8TDS5 423 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 KBTBD7Q8WVZ9 684 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ELMO1Q92556 727 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SLC4A5Q9BY07 1137 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ACE2Q9BYF1 805 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 LIMD1Q9UGP4 676 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TNPO3Q9Y5L0 923 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 JCADQ9P266 1359 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 H3BM21 787 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 LIN7AO14910 233 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SSNA1O43805 119 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TLL1O43897 1013 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF286BP0CG31 522 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 S100A3P33764 101 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CD151P48509 253 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CDH8P55286 799 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 STK4Q13043 487 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 POU6F1Q14863 301 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 NUMA1Q14980 2115 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 NDUFA9Q16795 377 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SPANXN3Q5MJ09 141 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ATXN7L2Q5T6C5 722 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TFAP2DQ7Z6R9 452 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ARID3BQ8IVW6 561 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM176AQ96HP8 235 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF558Q96NG5 402 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ARHGAP9Q9BRR9 750 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ATP13A3Q9H7F0 1226 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 DNMT3LQ9UJW3 386 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ADAMTS12P58397 1594 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM64BA6NI03 449 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FAM25EA8MYX2 175 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 XKRYO14609 159 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 UBDO15205 165 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SCN2BO60939 215 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 RSL1D1O76021 490 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 LTFP02788 710 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CHRNGP07510 517 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 UBTFL6P0CB48 400 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 AKR1A1P14550 325 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 HSD17B3P37058 310 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CASRP41180 1078 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CRATP43155 626 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 INO80DQ53TQ3 878 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SAMD4BQ5PRF9 694 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TBCELQ5QJ74 424 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CDC42EP5Q6NZY7 148 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SCUBE1Q8IWY4 988 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CPA6Q8N4T0 437 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FIBCD1Q8N539 461 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 EFCAB3Q8N7B9 438 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM79Q9BSE2 394 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 HGH1Q9BTY7 390 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 MCUBQ9NWR8 336 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 GPC6Q9Y625 555 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms