RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RNF225M0QZC1 329 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 PRPF4O43172 522 aaKnown RBP eCLIP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 SIX3O95343 332 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 TGFAP01135 160 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ZFYP08048 801 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 GSTP1P09211 210 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 PRKAR1AP10644 381 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ITGA4P13612 1032 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 CCDC130P13994 396 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 IL1R1P14778 569 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 PRKCAP17252 672 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 AGAP20933 346 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 STARP49675 285 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 RPS6KA3P51812 740 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ARFIP2P53365 341 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 GSCP56915 257 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ARPC4P59998 168 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 NCF4Q15080 339 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 Q3ZCU0 254 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 CCDC14Q49A88 953 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 CRY2Q49AN0 593 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 THEMIS2Q5TEJ8 643 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ANKRD40Q6AI12 368 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 CCDC103Q8IW40 242 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 SYT2Q8N9I0 419 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 EIF1ADQ8N9N8 165 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 OR2T34Q8NGX1 318 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 GLMPQ8WWB7 406 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 THOC1Q96FV9 657 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 RBM17Q96I25 401 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 RAX2Q96IS3 184 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 C1orf43Q9BWL3 253 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 SPZ1Q9BXG8 430 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ZNF341Q9BYN7 854 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 TSGA10Q9BZW7 698 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 TRIM31Q9BZY9 425 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 THAP2Q9H0W7 228 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 TP63Q9H3D4 680 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 RIBC2Q9H4K1 309 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 BICC1Q9H694 974 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 ZNF552Q9H707 407 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 EMC3Q9P0I2 261 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 DDX25Q9UHL0 483 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 CPA4Q9UI42 421 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 AJAP1Q9UKB5 411 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 CAPN11Q9UMQ6 739 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 GAB2Q9UQC2 676 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 MRPS2Q9Y399 296 aaKnown RBP5.01□□□□□ -1.61
SDCBP-213ENST00000630925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.01□□□□□ -1.616e-6■□□□□ 10.2
SDCBP-213ENST00000630925 CHD4Q14839 1912 aa5.01□□□□□ -1.61
SDCBP-213ENST00000630925 TTC26A0AVF1 554 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 TTC34A8MYJ7 566 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 MEIS2O14770 477 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 ST8SIA5O15466 376 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 RRP8O43159 456 aaKnown RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 KLK10O43240 276 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 MTX2O75431 263 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 GDF11O95390 407 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 GNA14O95837 355 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 URODP06132 367 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 FYNP06241 537 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 LCP1P13796 627 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 AHCYP23526 432 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 SOX18P35713 384 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 ETV3P41162 512 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 PRKCIP41743 596 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 PTGIRP43119 386 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 LMAN1P49257 510 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 FLT3LGP49771 235 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 KIAA1024LP59773 190 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 SPIRE1Q08AE8 756 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 SCRN1Q12765 414 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 HYAL2Q12891 473 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 AIMP2Q13155 320 aaKnown RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 TUBB3Q13509 450 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 SNTB1Q13884 538 aaKnown RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 USP10Q14694 798 aaKnown RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 CRY1Q16526 586 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 ARSJQ5FYB0 599 aaPredicted RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 TMTC4Q5T4D3 741 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 TTC22Q5TAA0 569 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 ERICH5Q6P6B1 374 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 RBM43Q6ZSC3 357 aaKnown RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 RNF44Q7L0R7 432 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 GPR142Q7Z601 462 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 STK32CQ86UX6 486 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 AMZ2Q86W34 360 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 ST7LQ8TDW4 575 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 DPF2Q92785 391 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 NT5C3BQ969T7 300 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 PHF21BQ96EK2 531 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 SAMD8Q96LT4 415 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 FCRL4Q96PJ5 515 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 SMC6Q96SB8 1091 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 MMP19Q99542 508 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 GLIS2Q9BZE0 524 aaPredicted RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 OSBPL6Q9BZF3 934 aa5□□□□□ -1.61
SDCBP-213ENST00000630925 CRNKL1Q9BZJ0 848 aaKnown RBP5□□□□□ -1.61
SDCBP-213ENST00000630925 GPR62Q9BZJ7 368 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms