RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 TSPY8P0CW00 308 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 VEGFAP15692 232 aaPredicted RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 YY1P25490 414 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 NF2P35240 595 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 HALP42357 657 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 PGDP52209 483 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 NXPH1P58417 271 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ICA1Q05084 483 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 STIM1Q13586 685 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 BLMHQ13867 455 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 SPARCL1Q14515 664 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 TBCCQ15814 346 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 STX1AQ16623 288 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ADCK5Q3MIX3 580 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ZACNQ401N2 412 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 FILIP1LQ4L180 1135 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 CCDC38Q502W7 563 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 INO80DQ53TQ3 878 aaPredicted RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 ANO1Q5XXA6 986 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ABLIM2Q6H8Q1 611 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 GALNT17Q6IS24 598 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 MRNIPQ6NTE8 343 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 APOBEC3HQ6NTF7 200 aaKnown RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 CRIP3Q6Q6R5 217 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 Q6YL49 198 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 Q6ZNX1 250 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 USP50Q70EL3 339 aaPredicted RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 ZNF589Q86UQ0 364 aaPredicted RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 ZSCAN30Q86W11 494 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 APOBEC3FQ8IUX4 373 aaKnown RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 CACNA2D3Q8IZS8 1091 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 Q8N1X5 172 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 METTL25Q8N6Q8 603 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ATG16L2Q8NAA4 619 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 SMCR8Q8TEV9 937 aaPredicted RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 SOCS4Q8WXH5 440 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 LINC00476Q8WZB0 136 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 MRPS27Q92552 414 aaKnown RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 FKBP10Q96AY3 582 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ZDHHC12Q96GR4 267 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 FBXL20Q96IG2 436 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 PRMT6Q96LA8 375 aaPredicted RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 HAPLN3Q96S86 360 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 RMDN3Q96TC7 470 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 NAP1L4Q99733 375 aaKnown RBP4.47□□□□□ -1.69
ATRX-209ENST00000623242 SLC26A6Q9BXS9 759 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 ZNF341Q9BYN7 854 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 SLC25A32Q9H2D1 315 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 TMEM8AQ9HCN3 771 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 GGA3Q9NZ52 723 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 GRHPRQ9UBQ7 328 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 DNAJB11Q9UBS4 358 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 CNPY2Q9Y2B0 182 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 DTNAQ9Y4J8 743 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 COL4A5P29400 1685 aa4.47□□□□□ -1.69
ATRX-209ENST00000623242 GAKO14976 1311 aa4.46□□□□□ -1.69
ATRX-209ENST00000623242 FLT1P17948 1338 aa4.46□□□□□ -1.69
ATRX-209ENST00000623242 ARAP2Q8WZ64 1704 aa4.46□□□□□ -1.69
ATRX-209ENST00000623242 OR2W5A6NFC9 320 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 SYT5O00445 386 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 TRIM38O00635 465 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 PCDH17O14917 1159 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 SLC16A3O15427 465 aaKnown RBP4.46□□□□□ -1.7
ATRX-209ENST00000623242 COQ9O75208 318 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 ENTPD3O75355 529 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 SKAP2O75563 359 aaPredicted RBP4.46□□□□□ -1.7
ATRX-209ENST00000623242 ZNF202O95125 648 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 TUBB4AP04350 444 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 IL6RP08887 468 aaPredicted RBP4.46□□□□□ -1.7
ATRX-209ENST00000623242 ELFN1P0C7U0 828 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 KRT4P19013 534 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 TNFRSF1AP19438 455 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 GNA11P29992 359 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
ATRX-209ENST00000623242 SLC5A2P31639 672 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 ADRA1BP35368 520 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 SERPINF1P36955 418 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 MPLP40238 635 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 FOLR3P41439 243 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 GATMP50440 423 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 TIRAPP58753 221 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 NLRP5P59047 1200 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 CEBPZQ03701 1054 aaKnown RBP4.46□□□□□ -1.7
ATRX-209ENST00000623242 FOXI1Q12951 378 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 PRKG1Q13976 671 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 PTK2BQ14289 1009 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 PTPRRQ15256 657 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 PTPAQ15257 358 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 TREML2Q5T2D2 321 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 ADALQ6DHV7 355 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 TLDC1Q6P9B6 456 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 DPY19L3Q6ZPD9 716 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 ZNF627Q7L945 461 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 KRT73Q86Y46 540 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 SLC44A3Q8N4M1 653 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 MYCT1Q8N699 235 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 BEND2Q8NDZ0 799 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 OR1N1Q8NGS0 311 aa4.46□□□□□ -1.7
ATRX-209ENST00000623242 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms