RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 UBA2Q9UBT2 640 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 GPSM3Q9Y4H4 160 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PCDHB4Q9Y5E5 795 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PCDHGA8Q9Y5G5 932 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 C1orf232A0A0U1RR37 186 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 DENND3A2RUS2 1198 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 TMX2-CTNND1H3BSU7 103 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 H7C0C1 242 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 CCRL2O00421 344 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 ENPP3O14638 875 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 KCNJ13O60928 360 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 ICAM1P05362 532 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 RALAP11233 206 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF26P17031 533 aaPredicted RBP7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 ITIH1P19827 911 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 MAP4P27816 1152 aaKnown RBP7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 L1CAMP32004 1257 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 GRIK1P39086 918 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 NAMPTP43490 491 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 AQP5P55064 265 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 GJA9P57773 515 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 TSPY1Q01534 308 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 TAGLNQ01995 201 aaKnown RBP7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 OCA2Q04671 838 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 MTMR1Q13613 665 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 XKR9Q5GH70 373 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 FAM160B2Q86V87 743 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 CPXCR1Q8N123 301 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 SIX6OS1Q8N1H7 587 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 Q8N9G6 341 aaPredicted RBP7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 GLIS1Q8NBF1 620 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC4A11Q8NBS3 891 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 GALNT6Q8NCL4 622 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 FBXL13Q8NEE6 735 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 POMGNT1Q8WZA1 660 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 CDKL2Q92772 493 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 RILPQ96NA2 401 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 TAAR1Q96RJ0 339 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 TMEM79Q9BSE2 394 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 DEFB129Q9H1M3 183 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 SCUBE2Q9NQ36 999 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 RAB20Q9NX57 234 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 HMGXB4Q9UGU5 601 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 VPS28Q9UK41 221 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 FEM1BQ9UK73 627 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 ARHGAP26Q9UNA1 814 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 NOSIPQ9Y314 301 aaKnown RBP7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 TESMINQ9Y4I5 508 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 PTPRJQ12913 1337 aa7.65□□□□□ -1.18
TRIM49B-202ENST00000622138 IQANK1A0A1B0GTG1 560 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 A8MU76 341 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 PLA2G6O60733 806 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FAM155BO75949 473 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 ERBB2P04626 1255 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FDX1P10109 184 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 KRT10P13645 584 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TCF4P15884 667 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TSHRP16473 764 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 GRK2P25098 689 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 RFC1P35251 1148 aaPredicted RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 IDUAP35475 653 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 GJC1P36383 396 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF135P52742 658 aaPredicted RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FAAP100Q0VG06 881 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TRAF2Q12933 501 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 KLF1Q13351 362 aaPredicted RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 RAB39AQ14964 217 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 MORF4L2Q15014 288 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 HERC3Q15034 1050 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 MAPRE1Q15691 268 aaKnown RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 SMU1Q2TAY7 513 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TEX44Q53QW1 395 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FSCBQ5H9T9 825 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 CYP4A22Q5TCH4 519 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 GPR107Q5VW38 600 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FAM122CQ6P4D5 195 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TMEM26Q6ZUK4 368 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 NIPA1Q7RTP0 329 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 CPNE9Q8IYJ1 553 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TMEM102Q8N9M5 508 aaPredicted RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 SNX31Q8N9S9 440 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FAM151AQ8WW52 585 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 JDP2Q8WYK2 163 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 ERLEC1Q96DZ1 483 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 CDHR1Q96JP9 859 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 MFSD14AQ96MC6 490 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 ACAP3Q96P50 834 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 FAM111AQ96PZ2 611 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 PAFAH2Q99487 392 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 EFHD1Q9BUP0 239 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 TRIT1Q9H3H1 467 aaKnown RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 ACSS3Q9H6R3 686 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 COPS7BQ9H9Q2 264 aaPredicted RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 NANOGQ9H9S0 305 aa7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 GPN2Q9H9Y4 310 aaPredicted RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 RAVER2Q9HCJ3 691 aaKnown RBP7.64□□□□□ -1.19
TRIM49B-202ENST00000622138 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms