RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PDE1CQ14123 709 aaPredicted RBP13.9□□□□□ -0.18
NEK3-205ENST00000610828 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 CTXN3Q4LDR2 81 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ANKRD20A4Q4UJ75 823 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 MANEALQ5VSG8 457 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ATG16L1Q676U5 607 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 NAPEPLDQ6IQ20 393 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ASRGL1Q7L266 308 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 LZTR1Q8N653 840 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 SPATA22Q8NHS9 363 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 GPR152Q8TDT2 470 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ACMSDQ8TDX5 336 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 CPNE1Q99829 537 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 SLC39A8Q9C0K1 460 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 HMX1Q9NP08 348 aaPredicted RBP13.9□□□□□ -0.18
NEK3-205ENST00000610828 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 SIRPGQ9P1W8 387 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 HAO1Q9UJM8 370 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 SCML2Q9UQR0 700 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 PCDHB5Q9Y5E4 795 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 HS3ST4Q9Y661 456 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ZCWPW2A0A1B0GU75 182 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 MGRN1O60291 552 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 USP46P62068 366 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 CDH17Q12864 832 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 SNCBQ16143 134 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 HSP90AA5PQ58FG0 334 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 C16orf46Q6P387 395 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 TTC9BQ8N6N2 239 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 TSGA13Q96PP4 275 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 TMEM120AQ9BXJ8 343 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 IL22Q9GZX6 179 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 FBXO44Q9H4M3 255 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ARHGEF3Q9NR81 526 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 STK38LQ9Y2H1 464 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 KCNU1A8MYU2 1149 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 ARVCFO00192 962 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 SYN3O14994 580 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 MAFKO60675 156 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 GLRA3O75311 464 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 ATP5HO75947 161 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 MT-CYBP00156 380 aaPredicted RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 BPGMP07738 259 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 KRT16P08779 473 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 DLDP09622 509 aaKnown RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 SELPP16109 830 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 TYK2P29597 1187 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 HTR7P34969 479 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 NPY2RP49146 381 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 N4BP2L1Q5TBK1 243 aaPredicted RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 KYAT3Q6YP21 454 aaKnown RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 STRA8Q7Z7C7 330 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 C8orf48Q96LL4 319 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 KCNK13Q9HB14 408 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 HEY2Q9UBP5 337 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 AAR2Q9Y312 384 aaKnown RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 NUMBLQ9Y6R0 609 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 BPTFQ12830 3046 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 FAM237BA0A1B0GVD1 139 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 MAGEB16A2A368 324 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 CCDC78A2IDD5 438 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 KIF3CO14782 793 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 SOAT2O75908 522 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 CBX6O95503 412 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 IL1BP01584 269 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 MYL2P10916 166 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 GATMP50440 423 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 MNAT1P51948 309 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 PPM1JQ5JR12 505 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 CES4AQ5XG92 561 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 ZCCHC23Q6ZST2 131 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 CLNKQ7Z7G1 428 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 LINC00523Q86TU6 105 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 GPR62Q9BZJ7 368 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 ZNF395Q9H8N7 513 aaPredicted RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
NEK3-205ENST00000610828 GMIPQ9P107 970 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
NEK3-205ENST00000610828 E2F8A0AVK6 867 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 MATN3O15232 486 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 BIRC5O15392 142 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 NBNO60934 754 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 CPB1P15086 417 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms