RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TMEM135Q86UB9 458 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 IFNLR1Q8IU57 520 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 ERI1Q8IV48 349 aaKnown RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 PLD6Q8N2A8 252 aaKnown RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 TMEM102Q8N9M5 508 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 URGCPQ8TCY9 931 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 PGBD4Q96DM1 585 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 DPP3Q9NY33 737 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 MAGEB16A2A368 324 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 ACOT8O14734 319 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 PFDN1O60925 122 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 MLH1P40692 756 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 RPL34P49207 117 aaKnown RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 CXCL9Q07325 125 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 FSTL1Q12841 308 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 CEACAM7Q14002 265 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 IRAK1BP1Q5VVH5 260 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 FSTL4Q6MZW2 842 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 CHERPQ8IWX8 916 aaKnown RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 SCUBE3Q8IX30 993 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 TNS4Q8IZW8 715 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 LILRA2Q8N149 483 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 LRRC43Q8N309 656 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 GAB3Q8WWW8 586 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 RCN3Q96D15 328 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 P2RY11Q96G91 374 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 BIRC8Q96P09 236 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 PKP2Q99959 881 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 OXCT2Q9BYC2 517 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-220ENST00000608988 ZNF358Q9NW07 568 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 APPL1Q9UKG1 709 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 CEPT1Q9Y6K0 416 aa22.81■■□□□ 1.24
SHANK2-220ENST00000608988 ERI2A8K979 691 aaKnown RBP22.8■■□□□ 1.24
SHANK2-220ENST00000608988 SLC10A6Q3KNW5 377 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 TRIM50Q86XT4 487 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 TSNARE1Q96NA8 513 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 GPR20Q99678 358 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 OSBPL11Q9BXB4 747 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 ZBTB26Q9HCK0 441 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 BFARQ9NZS9 450 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 SUCOQ9UBS9 1254 aaKnown RBP22.8■■□□□ 1.24
SHANK2-220ENST00000608988 RAD54BQ9Y620 910 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 ZSWIM8A7E2V4 1837 aa22.8■■□□□ 1.24
SHANK2-220ENST00000608988 PTPRFP10586 1907 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 C8BP07358 591 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 HSPA1AP0DMV8 641 aaKnown RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 HSPA1BP0DMV9 641 aaKnown RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 CYP2C9P11712 490 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 ATP6V1B1P15313 513 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 CDH2P19022 906 aaPredicted RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 PSMB4P28070 264 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 ACADSBP45954 432 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 TUBA4AP68366 448 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 UNC93AQ86WB7 457 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 CROCCP3Q8IVE0 287 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 KLHL23Q8NBE8 558 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 RIN3Q8TB24 985 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 DUS3LQ96G46 650 aaKnown RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 ZNF597Q96LX8 424 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 AGAP3Q96P47 875 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 FZD10Q9ULW2 581 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 A0A0J9YVX5 310 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 GRID2O43424 1007 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 HBP1O60381 514 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 C2P06681 752 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 COL6A2P12110 1019 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 MPSTP25325 297 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 ALDH3B2P48448 385 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 CSRP3P50461 194 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 CDK9P50750 372 aaKnown RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 C6orf52Q5T4I8 152 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 IYDQ6PHW0 289 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 C12orf29Q8N999 325 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 ZNF669Q96BR6 464 aaPredicted RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 FCRL3Q96P31 734 aaPredicted RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 LGMNQ99538 433 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 MCMBPQ9BTE3 642 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 ACE2Q9BYF1 805 aaPredicted RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 DNAI2Q9GZS0 605 aa22.79■■□□□ 1.24
SHANK2-220ENST00000608988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.79■■□□□ 1.242e-6■□□□□ 9.6
SHANK2-220ENST00000608988 RSL24D1Q9UHA3 163 aaKnown RBP22.79■■□□□ 1.24
SHANK2-220ENST00000608988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.78■■□□□ 1.24
SHANK2-220ENST00000608988 MFSD11O43934 449 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 GOT1P17174 413 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 SLC5A2P31639 672 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 POLD2P49005 469 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 ADARP55265 1226 aaKnown RBP22.78■■□□□ 1.24
SHANK2-220ENST00000608988 CDKL1Q00532 357 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 MS4A2Q01362 244 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 NSUN2Q08J23 767 aaKnown RBP eCLIP22.78■■□□□ 1.24
SHANK2-220ENST00000608988 PAFAH1B3Q15102 231 aaKnown RBP22.78■■□□□ 1.24
SHANK2-220ENST00000608988 CDR2LQ86X02 465 aaPredicted RBP22.78■■□□□ 1.24
SHANK2-220ENST00000608988 TSPAN14Q8NG11 270 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 ASB9Q96DX5 294 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 MPHOSPH6Q99547 160 aaKnown RBP22.78■■□□□ 1.24
SHANK2-220ENST00000608988 A0A0G2JMZ2 1700 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 LRRC37A2A6NM11 1700 aa22.78■■□□□ 1.24
SHANK2-220ENST00000608988 AP3B1O00203 1094 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 GABBR2O75899 941 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 AP2A1O95782 977 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms