RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GPR142Q7Z601 462 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 MAPK15Q8TD08 544 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 ZFP42Q96MM3 310 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 TINF2Q9BSI4 451 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 MLPHQ9BV36 600 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 DNAI2Q9GZS0 605 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 FAM96AQ9H5X1 160 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 DDX43Q9NXZ2 648 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CPSF2Q9P2I0 782 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 CDH22Q9UJ99 828 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 ADAM28Q9UKQ2 775 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 SNX10Q9Y5X0 201 aa20.66■□□□□ 0.9
SHKBP1-225ENST00000600733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 BUD23O43709 281 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 MYL4P12829 197 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 TPH1P17752 444 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 ITGAXP20702 1163 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CRABP2P29373 138 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 PGGT1BP53609 377 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 PPIDQ08752 370 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 SEMA3BQ13214 749 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CCNIQ14094 377 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 LRRC36Q1X8D7 754 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 KCTD11Q693B1 232 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 DEFB107AQ8IZN7 70 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 TOP6BLQ8N6T0 577 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 SLC26A7Q8TE54 656 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 LENG1Q96BZ8 264 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CMTM5Q96DZ9 223 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 KCNK16Q96T55 309 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 DDX50Q9BQ39 737 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 ABHD16BQ9H3Z7 469 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CASS4Q9NQ75 786 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CHRAC1Q9NRG0 131 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 UBP1Q9NZI7 540 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 ASB3Q9Y575 518 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CCDC78A2IDD5 438 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 MBLAC1A4D2B0 266 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 MAGEA13PA6NCF6 341 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 LTFP02788 710 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CYP2B6P20813 491 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CDK7P50613 346 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CUL3Q13618 768 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CFAP157Q5JU67 520 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 PRAMEF19Q5SWL8 479 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 PGM2L1Q6PCE3 622 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 SMG8Q8ND04 991 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 HIPK4Q8NE63 616 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 URGCPQ8TCY9 931 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 ACTRT2Q8TDY3 377 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 SLC10A4Q96EP9 437 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 CDH19Q9H159 772 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 TMEM30AQ9NV96 361 aa20.65■□□□□ 0.9
SHKBP1-225ENST00000600733 SMIM24O75264 130 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 F2P00734 622 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 C2P06681 752 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 FAM200BP0CF97 657 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 NCAM1P13591 858 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 CD1EP15812 388 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 AXLP30530 894 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 PSEN1P49768 467 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 PCBP1Q15365 356 aaKnown RBP eCLIP20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 TCHHL1Q5QJ38 904 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 EPGNQ6UW88 154 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 CLEC14AQ86T13 490 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 KCNMB4Q86W47 210 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 HPS6Q86YV9 775 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 IFT43Q96FT9 208 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 PIDD1Q9HB75 910 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 CRTAC1Q9NQ79 661 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 C20orf96Q9NUD7 363 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 CDY2AQ9Y6F7 541 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 CDY1Q9Y6F8 540 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 BTBD19C9JJ37 291 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 PTGESO14684 152 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 TREHO43280 583 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 USP17L7P0C7H9 530 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 NFKB1P19838 968 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 BTKQ06187 659 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 MPP3Q13368 585 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 AAGABQ6PD74 315 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 DHDDSQ86SQ9 333 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 GTF3C2Q8WUA4 911 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 GBA3Q9H227 469 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 IARS2Q9NSE4 1012 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 DDIT4Q9NX09 232 aa20.64■□□□□ 0.89
SHKBP1-225ENST00000600733 ZCCHC18P0CG32 403 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 DAOAP59103 153 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 ASPHQ12797 758 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 ITGA7Q13683 1181 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 LDLRAD1Q5T700 205 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 FOXB2Q5VYV0 432 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 PDZD4Q76G19 769 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 NPLOC4Q8TAT6 608 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 ZNF483Q8TF39 744 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 NTAN1Q96AB6 310 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 PPP1R36Q96LQ0 422 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 OR52B2Q96RD2 323 aa20.63■□□□□ 0.89
SHKBP1-225ENST00000600733 SLC9A7Q96T83 725 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms