RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 MANEALQ5VSG8 457 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 ZNF776Q68DI1 518 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-233ENST00000591622 FAM72DQ6L9T8 149 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 SCYL2Q6P3W7 929 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 SLFN11Q7Z7L1 901 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 FAM72BQ86X60 149 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 SYT12Q8IV01 421 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 SLC41A1Q8IVJ1 513 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 TRIM11Q96F44 468 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 ZNF419Q96HQ0 510 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-233ENST00000591622 C2orf49Q9BVC5 232 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-233ENST00000591622 MAGEB5Q9BZ81 275 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 TMEM74BQ9NUR3 256 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 DLL3Q9NYJ7 618 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 ADAMTS1Q9UHI8 967 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 SLC25A13Q9UJS0 675 aa16.84■□□□□ 0.29
CIRBP-233ENST00000591622 A0A0D9SEW6 157 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-233ENST00000591622 ILVBLA1L0T0 632 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 TMEM191CA6NGB0 347 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 GDF9O60383 454 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 RNASEH1O60930 286 aaKnown RBP16.83■□□□□ 0.28
CIRBP-233ENST00000591622 PLEKP08567 350 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-233ENST00000591622 DESP17661 470 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 ITPKAP23677 461 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-233ENST00000591622 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 TCEAL6Q6IPX3 200 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 ZNF783Q6ZMS7 281 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 TMC6Q7Z403 805 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 VPS36Q86VN1 386 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 CADM4Q8NFZ8 388 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 NETO1Q8TDF5 533 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 FRS2Q8WU20 508 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 PTPRN2Q92932 1015 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 FOXJ1Q92949 421 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 TCEAL3Q969E4 200 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 ZNF653Q96CK0 615 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 HSPA12BQ96MM6 686 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 PSMB7Q99436 277 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.83■□□□□ 0.28
CIRBP-233ENST00000591622 GPR174Q9BXC1 333 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 RETREG1Q9H6L5 497 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 CNOT8Q9UFF9 292 aaKnown RBP16.83■□□□□ 0.28
CIRBP-233ENST00000591622 PILRBQ9UKJ0 227 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 SCML1Q9UN30 329 aa16.83■□□□□ 0.28
CIRBP-233ENST00000591622 PLXND1Q9Y4D7 1925 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 PATE3B3GLJ2 98 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 KHNYNO15037 678 aaKnown RBP16.82■□□□□ 0.28
CIRBP-233ENST00000591622 ATP9BO43861 1147 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 LRIG2O94898 1065 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 MYBL1P10243 752 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 VAV1P15498 845 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 RHOQP17081 205 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 HOXD12P35452 270 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 AIF1P55008 147 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 TTC31Q49AM3 519 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-233ENST00000591622 ACCSLQ4AC99 568 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 EFHC2Q5JST6 749 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 PEAR1Q5VY43 1037 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-233ENST00000591622 RWDD4Q6NW29 188 aaKnown RBP16.82■□□□□ 0.28
CIRBP-233ENST00000591622 FAM124AQ86V42 546 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 SH2D3CQ8N5H7 860 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 DCAF4L2Q8NA75 395 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 FAM129BQ96TA1 746 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 RXFP3Q9NSD7 469 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 VPS51Q9UID3 782 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 CDV3Q9UKY7 258 aaKnown RBP16.82■□□□□ 0.28
CIRBP-233ENST00000591622 HS3ST2Q9Y278 367 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 SCINQ9Y6U3 715 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 CKAP5Q14008 2032 aa16.82■□□□□ 0.28
CIRBP-233ENST00000591622 ATXN2Q99700 1313 aaKnown RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 A0A087X0T9 212 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 SNAP91O60641 907 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 FAM228BP0C875 321 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 PSMA2P25787 234 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 HNRNPH3P31942 346 aaKnown RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 L1CAMP32004 1257 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 GNA12Q03113 381 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 ELAVL3Q14576 367 aaKnown RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 PUM1Q14671 1186 aaKnown RBP eCLIP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 DLG2Q15700 870 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 CST6Q15828 149 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 SYCP2LQ5T4T6 812 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 NLRP14Q86W24 1093 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 MMAAQ8IVH4 418 aaKnown RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 PYROXD2Q8N2H3 581 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 STK40Q8N2I9 435 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 OR7D4Q8NG98 312 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 FNIP1Q8TF40 1166 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 TBC1D31Q96DN5 1066 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 MRPL47Q9HD33 250 aaKnown RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 TMEM248Q9NWD8 314 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 ARHGAP20Q9P2F6 1191 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 MYO1AQ9UBC5 1043 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 EVLQ9UI08 416 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-233ENST00000591622 FZD10Q9ULW2 581 aa16.81■□□□□ 0.28
CIRBP-233ENST00000591622 NEU3Q9UQ49 428 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms