RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 FAM131CQ96AQ9 280 aa18.54■□□□□ 0.56
H3F3B-209ENST00000589949 NAA15Q9BXJ9 866 aaKnown RBP18.54■□□□□ 0.56
H3F3B-209ENST00000589949 SAMSN1Q9NSI8 373 aaKnown RBP18.54■□□□□ 0.56
H3F3B-209ENST00000589949 A0A1W2PR77 199 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 RNF103O00237 685 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 IL1BP01584 269 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 CYP11B1P15538 503 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 C5AR1P21730 350 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 CDH5P33151 784 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 RDXP35241 583 aaKnown RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 CXCR3P49682 368 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 RNASE9P60153 205 aaKnown RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 ELAVL3Q14576 367 aaKnown RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 TPD52L1Q16890 204 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 ALFQ53S48 1182 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 KLHDC7AQ5VTJ3 777 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 TTC39BQ5VTQ0 682 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 CCNI2Q6ZMN8 369 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-209ENST00000589949 PKD1L2Q7Z442 2459 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 OR14C36Q8NHC7 312 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 PSMB7Q99436 277 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 SIK2Q9H0K1 926 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 PTPRBP23467 1997 aa18.53■□□□□ 0.56
H3F3B-209ENST00000589949 LRRC72A6NJI9 287 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 GOLGA8CPA6NN73 597 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 ATP9BO43861 1147 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 PCDHGA12O60330 932 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 RTN2O75298 545 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 MT-CO1P00395 513 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 PRKCSHP14314 528 aaPredicted RBP18.52■□□□□ 0.56
H3F3B-209ENST00000589949 CCR5P51681 352 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 SCAPQ12770 1279 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 RAPGEF1Q13905 1077 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 POM121L1PQ3SYA9 428 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 TAF3Q5VWG9 929 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.52■□□□□ 0.56
H3F3B-209ENST00000589949 Q6ZVU0 165 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 NOP9Q86U38 636 aaKnown RBP18.52■□□□□ 0.56
H3F3B-209ENST00000589949 NOX5Q96PH1 765 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 TBCBQ99426 244 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 ARHGEF38Q9NXL2 777 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 APOBEC2Q9Y235 224 aaKnown RBP18.52■□□□□ 0.56
H3F3B-209ENST00000589949 TBC1D30Q9Y2I9 924 aa18.52■□□□□ 0.56
H3F3B-209ENST00000589949 TP53BP1Q12888 1972 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 NBEAQ8NFP9 2946 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 A0A1B0GTQ1 180 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 K7ERQ8 282 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 LATO43561 262 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 SNAP91O60641 907 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ADH1BP00325 375 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ERCC5P28715 1186 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 GABRB2P47870 512 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 VASPP50552 380 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 CCT8P50990 548 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 SULT2A1Q06520 285 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ZNF177Q13360 481 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 DLG2Q15700 870 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 RAB6CQ53S08 254 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 SMYD5Q6GMV2 418 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.556e-27■□□□□ 9.2
H3F3B-209ENST00000589949 ADAT2Q7Z6V5 191 aaKnown RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 XYLT1Q86Y38 959 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 GATAD2AQ86YP4 633 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 SPAG5Q96R06 1193 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ACE2Q9BYF1 805 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 TKTL2Q9H0I9 626 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 RAB6CQ9H0N0 254 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 SYNCQ9H7C4 482 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ARHGAP20Q9P2F6 1191 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 PPM1HQ9ULR3 514 aa18.51■□□□□ 0.55
H3F3B-209ENST00000589949 ZFYVE26Q68DK2 2539 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 UCHL3P15374 230 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 FLT3P36888 993 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 NNMTP40261 264 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 SULT1E1P49888 294 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 CNTN1Q12860 1018 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 ACCSLQ4AC99 568 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 AGBL4Q5VU57 503 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 SH2D3CQ8N5H7 860 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 TMEM35BQ8NCS4 154 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 CDC6Q99741 560 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 AASDHPPTQ9NRN7 309 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 MPP6Q9NZW5 540 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 VPS28Q9UK41 221 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 DOCK9Q9BZ29 2069 aa18.5■□□□□ 0.55
H3F3B-209ENST00000589949 TBC1D3DA0A087WVF3 549 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 TBC1D3IA0A087WXS9 549 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 TBC1D3EA0A087X179 549 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 TBC1D3KA0A087X1G2 549 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 A0A0D9SEW6 157 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 TBC1D3FA6NER0 549 aaPredicted RBP18.49■□□□□ 0.55
H3F3B-209ENST00000589949 TBC1D3LB9A6J9 549 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 CBX4O00257 560 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 MCF2LO15068 1137 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 CLDN11O75508 207 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 CTSLP07711 333 aa18.49■□□□□ 0.55
H3F3B-209ENST00000589949 MMEP08473 750 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms