RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 CNGB3Q9NQW8 809 aa15.16■□□□□ 0.02
IFT20-211ENST00000580991 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.16■□□□□ 0.02
IFT20-211ENST00000580991 TSPAN16Q9UKR8 245 aa15.16■□□□□ 0.02
IFT20-211ENST00000580991 U3KQA8 63 aa15.16■□□□□ 0.02
IFT20-211ENST00000580991 RP1P56715 2156 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 SCAMP1O15126 338 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 SPTLC2O15270 562 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 LUC7L3O95232 432 aaKnown RBP15.15■□□□□ 0.02
IFT20-211ENST00000580991 MYF5P13349 255 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 TGM2P21980 687 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 STK19P49842 368 aaPredicted RBP15.15■□□□□ 0.02
IFT20-211ENST00000580991 METAP1P53582 386 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 TBX4P57082 545 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 PPP3CAQ08209 521 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 BST2Q10589 180 aaKnown RBP15.15■□□□□ 0.02
IFT20-211ENST00000580991 STK4Q13043 487 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 CUL4BQ13620 913 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 GOLGA7BQ2TAP0 167 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 MS4A13Q5J8X5 152 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 AGBL4Q5VU57 503 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
IFT20-211ENST00000580991 CLEC14AQ86T13 490 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 SCML4Q8N228 414 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 LINC00301Q8NCQ3 95 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 KCTD13Q8WZ19 329 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 OR8D1Q8WZ84 308 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 IFT43Q96FT9 208 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 PRR11Q96HE9 360 aaPredicted RBP15.15■□□□□ 0.02
IFT20-211ENST00000580991 INTS4Q96HW7 963 aaKnown RBP15.15■□□□□ 0.02
IFT20-211ENST00000580991 ARHGAP9Q9BRR9 750 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 PREBQ9HCU5 417 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 NCKIPSDQ9NZQ3 722 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 HESX1Q9UBX0 185 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 ENTPD2Q9Y5L3 495 aa15.15■□□□□ 0.02
IFT20-211ENST00000580991 K7ESM1 405 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 RIOK3O14730 519 aaKnown RBP15.14■□□□□ 0.01
IFT20-211ENST00000580991 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
IFT20-211ENST00000580991 SUV39H1O43463 412 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 PPP6R2O75170 966 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 ITGB2P05107 769 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 TRIM49P0CI25 452 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 TRIM49CP0CI26 452 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 VAV1P15498 845 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 SYT1P21579 422 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 AFMP43652 599 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 INHBCP55103 352 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 DAOAP59103 153 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 CNTN1Q12860 1018 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 CUL4AQ13619 759 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 APCDD1Q8J025 514 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 CFAP52Q8N1V2 620 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 KIAA0895Q8NCT3 520 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 TPCN2Q8NHX9 752 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 MYEOVQ96EZ4 313 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 CALN1Q9BXU9 219 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 MMRN2Q9H8L6 949 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 ANKMY1Q9P2S6 941 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 SARDHQ9UL12 918 aa15.14■□□□□ 0.01
IFT20-211ENST00000580991 ATXN7L1Q9ULK2 861 aaPredicted RBP15.14■□□□□ 0.01
IFT20-211ENST00000580991 COL27A1Q8IZC6 1860 aaPredicted RBP15.14■□□□□ 0.01
IFT20-211ENST00000580991 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 SLC31A1O15431 190 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 TCEA3O75764 348 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 TNFSF15O95150 251 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 AFPP02771 609 aaKnown RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 SFTPCP11686 197 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 KRT13P13646 458 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 PDIA4P13667 645 aaKnown RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 PRLRP16471 622 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 HNRNPKP61978 463 aaKnown RBP eCLIP15.13■□□□□ 0.01
IFT20-211ENST00000580991 NFKB2Q00653 900 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 SULT2A1Q06520 285 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 ENPEPQ07075 957 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 ZNF177Q13360 481 aaPredicted RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 DCAF6Q58WW2 860 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 ZCCHC8Q6NZY4 707 aaKnown RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 NEK5Q6P3R8 708 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 FOXR1Q6PIV2 292 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 SHC4Q6S5L8 630 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 RBM44Q6ZP01 1051 aaKnown RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 OR13H1Q8NG92 308 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 WDR36Q8NI36 951 aaKnown RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 FRS2Q8WU20 508 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 MYOCQ99972 504 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 NUCKS1Q9H1E3 243 aaKnown RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
IFT20-211ENST00000580991 TMEM8AQ9HCN3 771 aa15.13■□□□□ 0.01
IFT20-211ENST00000580991 CPED1A4D0V7 1026 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 C1QTNF3-AMACRE9PGA6 284 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 EFSO43281 561 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 CALUO43852 315 aaPredicted RBP15.12■□□□□ 0.01
IFT20-211ENST00000580991 CUTAO60888 179 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 NEBLO76041 1014 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 GJB6O95452 261 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 ITGA2BP08514 1039 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 SETSIPP0DME0 302 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 LCP1P13796 627 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 ITGB6P18564 788 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 AKT2P31751 481 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms