RNA–Protein interactions for RNA: ENST00000578411.1

SSH2-207, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 2

Gene SSH2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-207ENST00000578411 PITRM1Q5JRX3 1037 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 RNF219Q5W0B1 726 aaPredicted RBP12.33□□□□□ -0.44
SSH2-207ENST00000578411 SV2BQ7L1I2 683 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 PTAR1Q7Z6K3 402 aaPredicted RBP12.33□□□□□ -0.44
SSH2-207ENST00000578411 B3GNT8Q7Z7M8 397 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 HJURPQ8NCD3 748 aaPredicted RBP12.33□□□□□ -0.44
SSH2-207ENST00000578411 NAT6Q93015 286 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 MIB2Q96AX9 1013 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
SSH2-207ENST00000578411 NOX5Q96PH1 765 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 OLA1Q9NTK5 396 aaKnown RBP12.33□□□□□ -0.44
SSH2-207ENST00000578411 STIM2Q9P246 746 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 CCDC39Q9UFE4 941 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 PISDQ9UG56 409 aa12.33□□□□□ -0.44
SSH2-207ENST00000578411 SPENQ96T58 3664 aaKnown RBP12.32□□□□□ -0.44
SSH2-207ENST00000578411 IRAK2O43187 625 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 MSI1O43347 362 aaKnown RBP12.32□□□□□ -0.44
SSH2-207ENST00000578411 AGFG2O95081 481 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 JMJD7P0C870 316 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 NME1P15531 152 aaKnown RBP12.32□□□□□ -0.44
SSH2-207ENST00000578411 CASP4P49662 377 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 DEFB133Q30KQ1 61 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 GCNT7Q6ZNI0 430 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 XXYLT1Q8NBI6 393 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 FIBINQ8TAL6 211 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 PTPRN2Q92932 1015 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 EPSTI1Q96J88 318 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 SPAG5Q96R06 1193 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 CCDC3Q9BQI4 270 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 PCDHB11Q9Y5F2 797 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 LRBAP50851 2863 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 CACNA1DQ01668 2161 aa12.32□□□□□ -0.44
SSH2-207ENST00000578411 PRAMEF33A0A0G2JMD5 474 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 TYW5A2RUC4 315 aaKnown RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 A6NNZ2 444 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 NVLO15381 856 aaKnown RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 VNN1O95497 513 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 BMP15O95972 392 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 VAV1P15498 845 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 POU3F2P20265 443 aaPredicted RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 HNRNPA2B1P22626 353 aaKnown RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 SLC6A4P31645 630 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 HOXD13P35453 343 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 CD97P48960 835 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 RPIAP49247 311 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 CLDN2P57739 230 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 ECT2LQ008S8 904 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 INCA1Q0VD86 236 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 FAM46CQ5VWP2 391 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 MMS22LQ6ZRQ5 1243 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 ABI3BPQ7Z7G0 1075 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 PARGQ86W56 976 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 OR8D1Q8WZ84 308 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 KLK6Q92876 244 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
SSH2-207ENST00000578411 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 SLCO3A1Q9UIG8 710 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 SALL4Q9UJQ4 1053 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 CSNK1G3Q9Y6M4 447 aa12.31□□□□□ -0.44
SSH2-207ENST00000578411 GOLGA6L7A0A1B0GV03 622 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 A0A1W2PQU0 124 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 D6RAR5 112 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 C1QTNF3-AMACRE9PGA6 284 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
SSH2-207ENST00000578411 EIF3DO15371 548 aaKnown RBP eCLIP12.3□□□□□ -0.44
SSH2-207ENST00000578411 AQP9O43315 295 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 MOCS3O95396 460 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 CSF2P04141 144 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 TNFRSF8P28908 595 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 SLC11A2P49281 568 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 AP3M2P53677 418 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 RRAGBQ5VZM2 374 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 SPOPLQ6IQ16 392 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
SSH2-207ENST00000578411 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 SLC35F3Q8IY50 421 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 C9orf43Q8TAL5 461 aaPredicted RBP12.3□□□□□ -0.44
SSH2-207ENST00000578411 LMX1AQ8TE12 382 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 RNF139Q8WU17 664 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 RPL10LQ96L21 214 aaKnown RBP12.3□□□□□ -0.44
SSH2-207ENST00000578411 BOCQ9BWV1 1114 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 NT5C1AQ9BXI3 368 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 FOXP3Q9BZS1 431 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 FOXJ2Q9P0K8 574 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 LOXL2Q9Y4K0 774 aa12.3□□□□□ -0.44
SSH2-207ENST00000578411 CENPEQ02224 2701 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms