RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 POLD3Q15054 466 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 PTPRNQ16849 979 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 DAB2IPQ5VWQ8 1189 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 IL31Q6EBC2 164 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 RETSATQ6NUM9 610 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 TMEM92Q6UXU6 159 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 RFX8Q6ZV50 586 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 NLRP14Q86W24 1093 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 TMEM139Q8IV31 216 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 PGBD3Q8N328 593 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 DCAF4L2Q8NA75 395 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 KCTD6Q8NC69 237 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 NUP205Q92621 2012 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 KCTD15Q96SI1 283 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 MAGEB5Q9BZ81 275 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 ATP13A1Q9HD20 1204 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 C2orf42Q9NWW7 574 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 HCN2Q9UL51 889 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 CXorf51AA0A1B0GTR3 108 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 BTNL10A8MVZ5 291 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 WASH3PC4AMC7 463 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 AXIN1O15169 862 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 SPOPO43791 374 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 GOT1P17174 413 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 GJC1P36383 396 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 CDH6P55285 790 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 SLC20A2Q08357 652 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 PDK2Q15119 407 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 CA9Q16790 459 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 PARP15Q460N3 678 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 ANO7Q6IWH7 933 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 CYP4V2Q6ZWL3 525 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 LZTR1Q8N653 840 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 ACRBPQ8NEB7 543 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 HMGB4Q8WW32 186 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 ALG14Q96F25 216 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 SPON2Q9BUD6 331 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 TMEM245Q9H330 911 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 RCOR3Q9P2K3 495 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZNF212Q9UDV6 495 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 OR51B4Q9Y5P0 310 aa13.08□□□□□ -0.32
TRAPPC1-206ENST00000573989 A0A0D9SEW6 157 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 EDDM13A0A1B0GTR0 161 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 ANTXRLA6NF34 631 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZSCAN5CA6NGD5 496 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 CBX4O00257 560 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 PJA2O43164 708 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 TDGF1P13385 188 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 TCF4P15884 667 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 SERPINB6P35237 376 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 FNTBP49356 437 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 CLCN6P51797 869 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 NDST2P52849 883 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 GSE1Q14687 1217 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 HNRNPA1L2Q32P51 320 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 USP39Q53GS9 565 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 ARTNQ5T4W7 220 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 METTL3Q86U44 580 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 C11orf74Q86VG3 221 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 RHOT1Q8IXI2 618 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 UMODL1-AS1Q8N2C9 162 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 OR7D4Q8NG98 312 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 OR52K2Q8NGK3 314 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 NELL1Q92832 810 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 ARHGEF2Q92974 986 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 SPACA7Q96KW9 195 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 CCDC114Q96M63 670 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 TSGA10Q9BZW7 698 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 DDX56Q9NY93 547 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 RAD54BQ9Y620 910 aa13.07□□□□□ -0.32
TRAPPC1-206ENST00000573989 NYNRINQ9P2P1 1898 aaKnown RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ARHGAP42A6NI28 874 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 KRT86O43790 486 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZNF217O75362 1048 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 PTMAP06454 111 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms