RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 LRP3O75074 770 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 LRIG2O94898 1065 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 F9P00740 461 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 KRT3P12035 628 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 PDGFRAP16234 1089 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 ABCB4P21439 1286 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 GPD1P21695 349 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 GLDCP23378 1020 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 SDC4P31431 198 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CASP14P31944 242 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 GBP1P32455 592 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 ADRA1BP35368 520 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 METAP1P53582 386 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CDH4P55283 916 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 SNX16P57768 344 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CDH18Q13634 790 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CA9Q16790 459 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CDO1Q16878 200 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 HNRNPA1L2Q32P51 320 aaKnown RBP8.93□□□□□ -0.98
SMG6-210ENST00000572205 FILIP1LQ4L180 1135 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 C9orf64Q5T6V5 341 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 TCEAL6Q6IPX3 200 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 DNAJC24Q6P3W2 148 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 PRR23BQ6ZRT6 265 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CPNE8Q86YQ8 564 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 PYROXD2Q8N2H3 581 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 MSANTD4Q8NCY6 345 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 RNF214Q8ND24 703 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 C1orf216Q8TAB5 229 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 FNIP1Q8TF40 1166 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 PTPRN2Q92932 1015 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 TCEAL3Q969E4 200 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 LOXL4Q96JB6 756 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 RPRD1AQ96P16 312 aaPredicted RBP8.93□□□□□ -0.98
SMG6-210ENST00000572205 FEM1AQ9BSK4 669 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 KLC2Q9H0B6 622 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 RSPH9Q9H1X1 276 aaPredicted RBP8.93□□□□□ -0.98
SMG6-210ENST00000572205 PDCL3Q9H2J4 239 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 WDCPQ9H6R7 721 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
SMG6-210ENST00000572205 TMEM74BQ9NUR3 256 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 PPARGC1AQ9UBK2 798 aaKnown RBP8.93□□□□□ -0.98
SMG6-210ENST00000572205 SLCO3A1Q9UIG8 710 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 ERVW-1Q9UQF0 538 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 HS3ST2Q9Y278 367 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 CHD8Q9HCK8 2581 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 FREM2Q5SZK8 3169 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 COL27A1Q8IZC6 1860 aaPredicted RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 BCLAF3A2AJT9 711 aaKnown RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 TTC34A8MYJ7 566 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 PATE3B3GLJ2 98 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 TIMM44O43615 452 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SNAP91O60641 907 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 MFAP3LO75121 409 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SIN3BO75182 1162 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 LRCH4O75427 683 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 CLDN11O75508 207 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 MT-CO1P00395 513 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 ASLP04424 464 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 IL1R2P27930 398 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 DRD3P35462 400 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 MPLP40238 635 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 TPMTP51580 245 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 RPS14P62263 151 aaKnown RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 ARF5P84085 180 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 KLHL30Q0D2K2 578 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 MTA1Q13330 715 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SLC12A1Q13621 1099 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 CCDC6Q16204 474 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 RABGAP1LQ5R372 815 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 TXNRD3NBQ6F5E7 133 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SERPINA13PQ6UXR4 307 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 TFAP2DQ7Z6R9 452 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 RETREG3Q86VR2 466 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 CACUL1Q86Y37 369 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 ZNF557Q8N988 423 aaPredicted RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 DCAF4L2Q8NA75 395 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 OR2T3Q8NH03 318 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 FAM174AQ8TBP5 190 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 FAM129BQ96TA1 746 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 DDX50Q9BQ39 737 aaKnown RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 CNPY3Q9BT09 278 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 NUP58Q9BVL2 599 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 PACSIN1Q9BY11 444 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SIK2Q9H0K1 926 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 RBSNQ9H1K0 784 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 OSBPL2Q9H1P3 480 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SEMA4GQ9NTN9 838 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 DLL3Q9NYJ7 618 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 WSB2Q9NYS7 404 aaPredicted RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 VPS51Q9UID3 782 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 FZD10Q9ULW2 581 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 PCDHGA5Q9Y5G8 931 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 ACTL7AQ9Y615 435 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.92□□□□□ -0.98
SMG6-210ENST00000572205 ZZEF1O43149 2961 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 ZFHX4Q86UP3 3567 aa8.92□□□□□ -0.98
SMG6-210ENST00000572205 SCN8AQ9UQD0 1980 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms