RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 EPAS1Q99814 870 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 TRIM56Q9BRZ2 755 aaKnown RBP8.18□□□□□ -1.1
SPG7-220ENST00000569363 MED10Q9BTT4 135 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 KATNBL1Q9H079 304 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 ABHD16BQ9H3Z7 469 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 Q9H521 79 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 NMRAL1Q9HBL8 299 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 SLC24A3Q9HC58 644 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 CNGB3Q9NQW8 809 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 HACD3Q9P035 362 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 NDUFA13Q9P0J0 144 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 C6orf203Q9P0P8 240 aaPredicted RBP8.18□□□□□ -1.1
SPG7-220ENST00000569363 CDH22Q9UJ99 828 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 VPS28Q9UK41 221 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 FBXW11Q9UKB1 542 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 TLK1Q9UKI8 766 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 RAP2CQ9Y3L5 183 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 MFHAS1Q9Y4C4 1052 aa8.18□□□□□ -1.1
SPG7-220ENST00000569363 CITO14578 2027 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 MEI4A8MW99 385 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 CASQ2O14958 399 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 HDAC3O15379 428 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 BUD23O43709 281 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 SNAI1O95863 264 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 UQCRBP14927 111 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 ERCC2P18074 760 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 GLDCP23378 1020 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 LMO2P25791 158 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 MLH1P40692 756 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PEX19P40855 299 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 LHX1P48742 406 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PAPOLAP51003 745 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 MTTPP55157 894 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 CRADDP78560 199 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 SATB1Q01826 763 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 GALNT2Q10471 571 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 TBL3Q12788 808 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 CDH17Q12864 832 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PRKAA1Q13131 559 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 SEMA3BQ13214 749 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 DYNC1I2Q13409 638 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 MED21Q13503 144 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 CCNIQ14094 377 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 GLRA4Q5JXX5 417 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 GJC2Q5T442 439 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 OTUD1Q5VV17 481 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 LIPMQ5VYY2 423 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 KCTD11Q693B1 232 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 CWF19L1Q69YN2 538 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 FSTL4Q6MZW2 842 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 ZYG11AQ6WRX3 759 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 MAVSQ7Z434 540 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 RSPH3Q86UC2 560 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 KCNMB4Q86W47 210 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 CCDC117Q8IWD4 279 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 KLHDC8BQ8IXV7 354 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 KBTBD2Q8IY47 623 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 GALNT15Q8N3T1 639 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 CPSF7Q8N684 471 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 TDRD5Q8NAT2 981 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 GSTCDQ8NEC7 633 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 RP9Q8TA86 221 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 GABPB2Q8TAK5 448 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 SLC7A14Q8TBB6 771 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 SLC26A7Q8TE54 656 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 ZNF483Q8TF39 744 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 PDCD6IPQ8WUM4 868 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 FCRL3Q96P31 734 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 TSGA13Q96PP4 275 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 DRC3Q9H069 523 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 FAM49AQ9H0Q0 323 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 NXF3Q9H4D5 531 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 RHOJQ9H4E5 214 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 MRPL40Q9NQ50 206 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 TCF7L2Q9NQB0 619 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PAPOLBQ9NRJ5 636 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 C20orf96Q9NUD7 363 aaPredicted RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 SLC38A7Q9NVC3 462 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 OXSMQ9NWU1 459 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 STK39Q9UEW8 545 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PPM1HQ9ULR3 514 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 AAR2Q9Y312 384 aaKnown RBP8.17□□□□□ -1.1
SPG7-220ENST00000569363 PSAT1Q9Y617 370 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 PTCH2Q9Y6C5 1203 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 SLC4A7Q9Y6M7 1214 aa8.17□□□□□ -1.1
SPG7-220ENST00000569363 ZCWPW2A0A1B0GU75 182 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 MBLAC1A4D2B0 266 aaPredicted RBP8.16□□□□□ -1.1
SPG7-220ENST00000569363 RGSL1A5PLK6 1076 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 G3V2L1 256 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 GABRDO14764 452 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 SPTLC1O15269 473 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
SPG7-220ENST00000569363 DDHD2O94830 711 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 TOP3BO95985 862 aaKnown RBP8.16□□□□□ -1.1
SPG7-220ENST00000569363 F2P00734 622 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 C2P06681 752 aa8.16□□□□□ -1.1
SPG7-220ENST00000569363 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms