RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 IGLV3-25P01717 112 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 PDIA4P13667 645 aaKnown RBP10.7□□□□□ -0.7
SF3B3-204ENST00000563739 RGS7P49802 495 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CSRP3P50461 194 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 ECT2LQ008S8 904 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 ENPEPQ07075 957 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 KCNMA1Q12791 1236 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 FGL2Q14314 439 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 ELAVL3Q14576 367 aaKnown RBP10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CBWD6Q4V339 395 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 C3orf38Q5JPI3 329 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CBWD3Q5JTY5 395 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 COLEC12Q5KU26 742 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CBWD5Q5RIA9 395 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CLEC14AQ86T13 490 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 TAC4Q86UU9 113 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CARNMT1Q8N4J0 409 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 KLK6Q92876 244 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 VOPP1Q96AW1 172 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 SKA1Q96BD8 255 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 PAGE5Q96GU1 130 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 ATXN7L3BQ96GX2 97 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 SLC46A1Q96NT5 459 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 DEPDC7Q96QD5 511 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 PRMT1Q99873 361 aaKnown RBP10.7□□□□□ -0.7
SF3B3-204ENST00000563739 DPH1Q9BZG8 443 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 CNGB3Q9NQW8 809 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 ABCC13Q9NSE7 274 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 KLHL11Q9NVR0 708 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 KLF15Q9UIH9 416 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 PCDHA7Q9UN72 937 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 DMTF1Q9Y222 760 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 OR51B4Q9Y5P0 310 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3DA0A087WVF3 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3IA0A087WXS9 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3EA0A087X179 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3KA0A087X1G2 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3FA6NER0 549 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3LB9A6J9 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 K7ESM1 405 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 SLC7A4O43246 635 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 NOBOXO60393 691 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 RNASEH1O60930 286 aaKnown RBP10.69□□□□□ -0.7
SF3B3-204ENST00000563739 IL1BP01584 269 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 LTFP02788 710 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 GP1BAP07359 652 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3HP0C7X1 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 THEGLP0DJG4 465 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 LCP1P13796 627 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 PDCP20941 246 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 NR2F2P24468 414 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBX4P57082 545 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 CLDN2P57739 230 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 ST8SIA6P61647 398 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 DAB2P98082 770 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 OVGP1Q12889 678 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 ZNF284Q2VY69 593 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 PERM1Q5SV97 790 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 BROXQ5VW32 411 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 NUGGCQ68CJ6 796 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3GQ6DHY5 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3CQ6IPX1 549 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 GUSBP11Q6P575 273 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 ABI3BPQ7Z7G0 1075 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 FAM186BQ8IYM0 893 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TBC1D3Q8IZP1 549 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-204ENST00000563739 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 RNF139Q8WU17 664 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 SLC35F5Q8WV83 523 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 ARRDC3Q96B67 414 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 FAXDC2Q96IV6 333 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 STARD5Q9NSY2 213 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 IL17BQ9UHF5 180 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 PPM1HQ9ULR3 514 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 TPX2Q9ULW0 747 aaKnown RBP10.69□□□□□ -0.7
SF3B3-204ENST00000563739 NBASA2RRP1 2371 aa10.69□□□□□ -0.7
SF3B3-204ENST00000563739 PRAMEF26H0Y7S4 382 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 RNF225M0QZC1 329 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-204ENST00000563739 RAD51BO15315 384 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 PDGFRAP16234 1089 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 WT1P19544 449 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-204ENST00000563739 RPL34P49207 117 aaKnown RBP10.68□□□□□ -0.7
SF3B3-204ENST00000563739 MXI1P50539 228 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 PLK1P53350 603 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 NFATC3Q12968 1075 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 ARL13BQ3SXY8 428 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 TMEM259Q4ZIN3 620 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 ZNF542PQ5EBM4 170 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 SYPL2Q5VXT5 272 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 RAP1GAP2Q684P5 730 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 KRT39Q6A163 491 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 LCLAT1Q6UWP7 414 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 Q6ZVU0 165 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 INTS8Q75QN2 995 aaKnown RBP10.68□□□□□ -0.7
SF3B3-204ENST00000563739 IFI44Q8TCB0 444 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 KAT5Q92993 513 aa10.68□□□□□ -0.7
SF3B3-204ENST00000563739 BMFQ96LC9 184 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms