RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PFKMP08237 780 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 MYL4P12829 197 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 NR2C2P49116 596 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 NCBP2-AS2Q69YL0 99 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 LRRC8BQ6P9F7 803 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 TIFABQ6ZNK6 161 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 EXOC8Q8IYI6 725 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 SNX31Q8N9S9 440 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 SMARCAD1Q9H4L7 1026 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 LRRC40Q9H9A6 602 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 WDR41Q9HAD4 459 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 SMIM31A0A1B0GVY4 71 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 EEF2KO00418 725 aaKnown RBP12.06□□□□□ -0.48
ABCA3-203ENST00000563623 MDM4O15151 490 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 HBP1O60381 514 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
ABCA3-203ENST00000563623 GJA8P48165 433 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
ABCA3-203ENST00000563623 LSAMPQ13449 338 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 LSM12Q3MHD2 195 aaKnown RBP12.06□□□□□ -0.48
ABCA3-203ENST00000563623 CCDC153Q494R4 210 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 AMIGO2Q86SJ2 522 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 RNF34Q969K3 372 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 RTP4Q96DX8 246 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 CPNE1Q99829 537 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 CCT7Q99832 543 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 RTKNQ9BST9 563 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 ASB7Q9H672 318 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 LRRC4Q9HBW1 653 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 ATXN10Q9UBB4 475 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 CDYLQ9Y232 598 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PCDHGB5Q9Y5G0 923 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 GPC4O75487 556 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 STAMBPO95630 424 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 GRIA4P48058 902 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 RABGGTBP53611 331 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PITX1P78337 314 aaPredicted RBP12.06□□□□□ -0.48
ABCA3-203ENST00000563623 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
ABCA3-203ENST00000563623 GRTP1Q5TC63 336 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 CYP2R1Q6VVX0 501 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 ADGRG6Q86SQ4 1221 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 ZNF567Q8N184 647 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 APBA2Q99767 749 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 SNTG2Q9NY99 539 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 EPS15L1Q9UBC2 864 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 MORF4L1Q9UBU8 362 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 IGKV6D-21A0A0A0MT36 114 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 RGSL1A5PLK6 1076 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 GAS2O43903 313 aaKnown RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 FAM58BPP0C7Q3 252 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 MCF2P10911 925 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SOX11P35716 441 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 RGS2P41220 211 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 MTTPP55157 894 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 KCTD2Q14681 263 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 ARL13AQ5H913 290 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SH2D4BQ5SQS7 431 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 PGM2L1Q6PCE3 622 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 B3GNT6Q6ZMB0 384 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SLC2A14Q8TDB8 520 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 RNF139Q8WU17 664 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 C18orf25Q96B23 403 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 FCRL3Q96P31 734 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 ACE2Q9BYF1 805 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 R3HDMLQ9H3Y0 253 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 PDZD7Q9H5P4 517 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 CYP4F12Q9HCS2 524 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 PTPRHQ9HD43 1115 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 GSRP00390 522 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 ME2P23368 584 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SLC12A2P55011 1212 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 CDK18Q07002 472 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 ADIGQ0VDE8 80 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 KCTD4Q8WVF5 259 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 NAT9Q9BTE0 207 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 CCDC28BQ9BUN5 200 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 FAF1Q9UNN5 650 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SNX13Q9Y5W8 968 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 HNRNPDQ14103 355 aaKnown RBP12.05□□□□□ -0.48
ABCA3-203ENST00000563623 PTK2BQ14289 1009 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 DPYSL2Q16555 572 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 KIZQ2M2Z5 673 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 CATSPER4Q7RTX7 472 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 KCNMB4Q86W47 210 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 EFCAB1Q9HAE3 211 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 CHRAC1Q9NRG0 131 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 STK39Q9UEW8 545 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 EVPLQ92817 2033 aa12.05□□□□□ -0.48
ABCA3-203ENST00000563623 HDAC3O15379 428 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms