RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PKN3Q6P5Z2 889 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 C11orf74Q86VG3 221 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 LZTR1Q8N653 840 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 RTL3Q8N8U3 475 aaKnown RBP14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 ZBTB44Q8NCP5 570 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 RAB6CQ9H0N0 254 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 MUC3BQ9H195 1237 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 MAGEH1Q9H213 219 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 DHX35Q9H5Z1 703 aaKnown RBP14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 OSGEPQ9NPF4 335 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 TMPRSS4Q9NRS4 437 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 MPP6Q9NZW5 540 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 PCSK1NQ9UHG2 260 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 SLC25A13Q9UJS0 675 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 VPS28Q9UK41 221 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 INTS6Q9UL03 887 aaKnown RBP14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 NEU3Q9UQ49 428 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 OR51B4Q9Y5P0 310 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 CACNA1IQ9P0X4 2223 aa14.35□□□□□ -0.11
PKNOX1-209ENST00000560448 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 RCCD1A6NED2 376 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 ZSCAN5CA6NGD5 496 aaPredicted RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 CREB3O43889 395 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 SYNCRIPO60506 623 aaKnown RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 ADAM23O75077 832 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 CNTN5O94779 1100 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 VAV2P52735 878 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 SLC25A11Q02978 314 aaKnown RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 GNA12Q03113 381 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 PDK2Q15119 407 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 IFI16Q16666 785 aaKnown RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 PTPRNQ16849 979 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 PARP15Q460N3 678 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 EMC10Q5UCC4 262 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 RETSATQ6NUM9 610 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 CYP4V2Q6ZWL3 525 aaPredicted RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 WDR5BQ86VZ2 330 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 CIR1Q86X95 450 aaPredicted RBP14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 MAP7D3Q8IWC1 876 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 SFTPA1Q8IWL2 248 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 ALG14Q96F25 216 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 PEBP4Q96S96 227 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 RAPGEFL1Q9UHV5 662 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 HCN2Q9UL51 889 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
PKNOX1-209ENST00000560448 TARSL2A2RTX5 802 aaKnown RBP14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 FAM72CH0Y354 149 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 H3BRJ5 948 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 EEF2KO00418 725 aaKnown RBP14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 PJA2O43164 708 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 KIF5CO60282 957 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 RAMP2O60895 175 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 CASQ1P31415 396 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 IL12RB1P42701 662 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 NDST2P52849 883 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 FAM72AQ5TYM5 149 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 FAM72DQ6L9T8 149 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 RFX8Q6ZV50 586 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 TFAP2DQ7Z6R9 452 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 FAM72BQ86X60 149 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 UMODL1-AS1Q8N2C9 162 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 CCDC33Q8N5R6 958 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 FAM71BQ8TC56 605 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 LACRTQ9GZZ8 138 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 PRDM16Q9HAZ2 1276 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 HPCAL4Q9UM19 191 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.11
PKNOX1-209ENST00000560448 MUC22E2RYF6 1773 aaPredicted RBP14.33□□□□□ -0.12
PKNOX1-209ENST00000560448 A0A1W2PQF6 199 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ZNF487B1APH4 448 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 H0Y858 1186 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 DYNC1I1O14576 645 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 DAPK3O43293 454 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 LILRB5O75023 590 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ZNF217O75362 1048 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 EPHX1P07099 455 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 RARAP10276 462 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 IL1R2P27930 398 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 MZF1P28698 734 aaPredicted RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 NBL1P41271 181 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 IRAK1P51617 712 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ZBTB16Q05516 673 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 KIF5AQ12840 1032 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 SFSWAPQ12872 951 aaKnown RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CAMK2GQ13555 558 aaPredicted RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 MESDQ14696 234 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 HNRNPA1L2Q32P51 320 aaKnown RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 C11orf63Q6NUN7 778 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 APCDD1Q8J025 514 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 PYROXD2Q8N2H3 581 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CASKIN2Q8WXE0 1202 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 BTBD6Q96KE9 485 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ZNF670Q9BS34 389 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ACE2Q9BYF1 805 aaPredicted RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 TSGA10Q9BZW7 698 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms