RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 A0A1W2PNU3 283 aaPredicted RBP17.13■□□□□ 0.33
HERC1-207ENST00000560316 O00370 1275 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 SLC31A1O15431 190 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 SLC7A4O43246 635 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 PIAS2O75928 621 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 LTFP02788 710 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 PRLRP16471 622 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 GTF2H1P32780 548 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 ENPEPQ07075 957 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 NFIL3Q16649 462 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 AGBL4Q5VU57 503 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 PMF1Q6P1K2 205 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 LGI2Q8N0V4 545 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 TMEM145Q8NBT3 493 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 FRS2Q8WU20 508 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 U3KQA8 63 aa17.13■□□□□ 0.33
HERC1-207ENST00000560316 GP1BAP07359 652 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 NNMTP40261 264 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 CSRP3P50461 194 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 ADAM9Q13443 819 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 ISXQ2M1V0 245 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 MAPK15Q8TD08 544 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 DQX1Q8TE96 717 aaKnown RBP17.12■□□□□ 0.33
HERC1-207ENST00000560316 OR8D1Q8WZ84 308 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 IRGQQ8WZA9 623 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
HERC1-207ENST00000560316 CALN1Q9BXU9 219 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 FZD3Q9NPG1 666 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 NLGN3Q9NZ94 848 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 COL12A1Q99715 3063 aa17.12■□□□□ 0.33
HERC1-207ENST00000560316 PMS2P1A4D2B8 440 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 RNGTTO60942 597 aaKnown RBP17.11■□□□□ 0.33
HERC1-207ENST00000560316 NEBLO76041 1014 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 FYNP06241 537 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
HERC1-207ENST00000560316 ALPPL2P10696 532 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 VDRP11473 427 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 PDGFRAP16234 1089 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 TGM2P21980 687 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 RBMS1P29558 406 aaKnown RBP17.11■□□□□ 0.33
HERC1-207ENST00000560316 TAS2R38P59533 333 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 SRSF1Q07955 248 aaKnown RBP eCLIP17.11■□□□□ 0.33
HERC1-207ENST00000560316 NFATC3Q12968 1075 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 CUL2Q13617 745 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 ZNF542PQ5EBM4 170 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 FAM46CQ5VWP2 391 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 RAP1GAP2Q684P5 730 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 CCDC81Q6ZN84 652 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 CIR1Q86X95 450 aaPredicted RBP17.11■□□□□ 0.33
HERC1-207ENST00000560316 LURAP1LQ8IV03 231 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 OR13H1Q8NG92 308 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 IFI44Q8TCB0 444 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 SLC35F5Q8WV83 523 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 TFAP2BQ92481 460 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 SLC39A13Q96H72 371 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 SLC46A1Q96NT5 459 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 NOX5Q96PH1 765 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 IL17BQ9UHF5 180 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 TLR6Q9Y2C9 796 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 PTPN13Q12923 2485 aa17.11■□□□□ 0.33
HERC1-207ENST00000560316 TACR2P21452 398 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
HERC1-207ENST00000560316 SKOR1P84550 965 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 ACCSLQ4AC99 568 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 FOXR1Q6PIV2 292 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 IGF2-ASQ6U949 168 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 DSG4Q86SJ6 1040 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 CHSY1Q86X52 802 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 EXD3Q8N9H8 876 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 SERPINB11Q96P15 392 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 MIS12Q9H081 205 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 PREBQ9HCU5 417 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 PPM1HQ9ULR3 514 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 NAALADL1Q9UQQ1 740 aa17.1■□□□□ 0.33
HERC1-207ENST00000560316 HEMK1Q9Y5R4 338 aaPredicted RBP17.1■□□□□ 0.33
HERC1-207ENST00000560316 A0A1W2PQU0 124 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 K7ESM1 405 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 DUSP3P51452 185 aaPredicted RBP17.09■□□□□ 0.33
HERC1-207ENST00000560316 CLDN2P57739 230 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 MCCD1P59942 119 aaPredicted RBP17.09■□□□□ 0.33
HERC1-207ENST00000560316 NUCB2P80303 420 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 ZSCAN23Q3MJ62 389 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 LCLAT1Q6UWP7 414 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 TAC4Q86UU9 113 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 SLC22A18ASQ8N1D0 253 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 PRR11Q96HE9 360 aaPredicted RBP17.09■□□□□ 0.33
HERC1-207ENST00000560316 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 FAM117AQ9C073 453 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 TJP2Q9UDY2 1190 aa17.09■□□□□ 0.33
HERC1-207ENST00000560316 BOD1L1Q8NFC6 3051 aa17.08■□□□□ 0.33
HERC1-207ENST00000560316 C1QTNF3-AMACRE9PGA6 284 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 M0QYV0 167 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 SCAMP1O15126 338 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 BNIP3LO60238 219 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 LZTS3O60299 673 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms