RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	KCTD15	Q96SI1	283 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	PSMB7	Q99436	277 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	BAG1	Q99933	345 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	FEM1A	Q9BSK4	669 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	SNRNP25	Q9BV90	132 aa	Known RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZYG11B	Q9C0D3	744 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	LACRT	Q9GZZ8	138 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	DHX35	Q9H5Z1	703 aa	Known RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	CD93	Q9NPY3	652 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	KLHL11	Q9NVR0	708 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	KIAA1522	Q9P206	1035 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	THAP10	Q9P2Z0	257 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	MMP17	Q9ULZ9	603 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	USP18	Q9UMW8	372 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	SLC8A2	Q9UPR5	921 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	TBC1D30	Q9Y2I9	924 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	PAXBP1	Q9Y5B6	917 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	NUP210	Q8TEM1	1887 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	TICRR	Q7Z2Z1	1910 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	NCOR1	O75376	2440 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	USP34	Q70CQ2	3546 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	MYO15A	Q9UKN7	3530 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778		A0A1B0GVM2	712 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TCAF2	A6NFQ2	919 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TTC34	A8MYJ7	566 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	EIF3CL	B5ME19	914 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	MYO1F	O00160	1098 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	LCE2B	O14633	110 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	PRPSAP2	O60256	369 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	ATG13	O75143	517 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	CLDN11	O75508	207 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	RNF8	O76064	485 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	PROSC	O94903	275 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	GOT1	P17174	413 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	POLR2E	P19388	210 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	IL4R	P24394	825 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	EPHB2	P29323	1055 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	OR1E1	P30953	314 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	NTSR1	P30989	418 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	L1CAM	P32004	1257 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	GJC1	P36383	396 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	SSR1	P43307	286 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	CCR3	P51677	355 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	CDH4	P55283	916 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	SLC25A11	Q02978	314 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	SCAP	Q12770	1279 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	PLEKHG6	Q3KR16	790 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	PPP6R3	Q5H9R7	873 aa	Predicted RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	EFHC2	Q5JST6	749 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	FAM182A	Q5T1J6	154 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	ERMARD	Q5T6L9	678 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	ANO7	Q6IWH7	933 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	LINGO4	Q6UY18	593 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	CACUL1	Q86Y37	369 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TMTC1	Q8IUR5	882 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	CCDC170	Q8IYT3	715 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	AHI1	Q8N157	1196 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	MDGA1	Q8NFP4	955 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	RLN3	Q8WXF3	142 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	NELL1	Q92832	810 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	EXOC4	Q96A65	974 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TTC17	Q96AE7	1141 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	EIF3C	Q99613	913 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	GABRG3	Q99928	467 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	SPON2	Q9BUD6	331 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TPSD1	Q9BZJ3	242 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	KLC2	Q9H0B6	622 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TMEM245	Q9H330	911 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	NOL6	Q9H6R4	1146 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	CWC15	Q9P013	229 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	IMPACT	Q9P2X3	320 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	PPARGC1A	Q9UBK2	798 aa	Known RBP	9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	TRIM10	Q9UDY6	481 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	IP6K2	Q9UHH9	426 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	AP4E1	Q9UPM8	1137 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	ERVW-1	Q9UQF0	538 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	HCN4	Q9Y3Q4	1203 aa		9.05	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZNF638	Q14966	1978 aa	Known RBP	9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	TCRBV21S2A2	A0A5A6	115 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	TYW5	A2RUC4	315 aa	Known RBP	9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	RNF103	O00237	685 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	SMAD6	O43541	496 aa	Known RBP	9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	TIMM44	O43615	452 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	BUB1	O43683	1085 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	EPHX1	P07099	455 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	RHOC	P08134	193 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	DLD	P09622	509 aa	Known RBP	9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	TNNT1	P13805	278 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	HOXB2	P14652	356 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	RHOQ	P17081	205 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	GABRG2	P18507	467 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	AMPD1	P23109	780 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	PCK1	P35558	622 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	MAGEA9	P43362	315 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	PLK1	P53350	603 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	NRG1	Q02297	640 aa	Predicted RBP	9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	ENPP2	Q13822	863 aa		9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	PIGH	Q14442	188 aa	Predicted RBP	9.04	□□□□□ -0.96
PRKCH-222	ENST00000556778	SPA17	Q15506	151 aa		9.04	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms