RNA–Protein interactions for RNA: ENST00000556431.1

SIVA1-208, Transcript of SIVA1 apoptosis inducing factor, human

TSL 2

Gene SIVA1, Length 4,142 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIVA1-208	ENST00000556431	COL4A1	P02462	1669 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	NHS	Q6T4R5	1651 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	PRR5-ARHGAP8	B1AHC4	643 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431		H3BSA7	217 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	TCF4	P15884	667 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	YBX3	P16989	372 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	9e-8	■■□□□ 11.9
SIVA1-208	ENST00000556431	ZNF24	P17028	368 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	TPH1	P17752	444 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	CASP2	P42575	452 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	ARHGAP8	P85298	464 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	3e-6	■■□□□ 12.1
SIVA1-208	ENST00000556431	TMEM53	Q6P2H8	277 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	ILDR2	Q71H61	639 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	CXorf38	Q8TB03	319 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	ZNF398	Q8TD17	642 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	SGF29	Q96ES7	293 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	APOPT1	Q96IL0	206 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	EURL	Q9NYK6	297 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	VANGL2	Q9ULK5	521 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	ST3GAL5	Q9UNP4	418 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	HBS1L	Q9Y450	684 aa	Known RBP	11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	TRIM17	Q9Y577	477 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	MYH11	P35749	1972 aa		11.69	□□□□□ -0.54
SIVA1-208	ENST00000556431	DOCK2	Q92608	1830 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431		F8W8V4	182 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	NCAM2	O15394	837 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	AVIL	O75366	819 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	FAM58BP	P0C7Q3	252 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TCN1	P20061	433 aa	Predicted RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	RPL10A	P62906	217 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	CRADD	P78560	199 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	VEPH1	Q14D04	833 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	KIF19	Q2TAC6	998 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TXNRD3NB	Q6F5E7	133 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TREML1	Q86YW5	311 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	IARS2	Q9NSE4	1012 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	NUDT5	Q9UKK9	219 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	DMTF1	Q9Y222	760 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	ARAP2	Q8WZ64	1704 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	MAST2	Q6P0Q8	1798 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	COPA	P53621	1224 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	ACTR3	P61158	418 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	FKBP1B	P68106	108 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TARBP2	Q15633	366 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	FAM117B	Q6P1L5	589 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	FBXO27	Q8NI29	283 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	ZFR	Q96KR1	1074 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	ZFP42	Q96MM3	310 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TWNK	Q96RR1	684 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TKTL2	Q9H0I9	626 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	ACSS3	Q9H6R3	686 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	IPP	Q9Y573	584 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	SHANK3	Q9BYB0	1731 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	ZMPSTE24	O75844	475 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	RPLP2	P05387	115 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	CDK4	P11802	303 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	MRPS6	P82932	125 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	EFEMP1	Q12805	493 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	NOMO1	Q15155	1222 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	CTXN3	Q4LDR2	81 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	AMIGO2	Q86SJ2	522 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	TMEM86A	Q8N2M4	240 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	RNF148	Q8N7C7	305 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	DDI1	Q8WTU0	396 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	FBXO32	Q969P5	355 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	EME1	Q96AY2	570 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	LRRC39	Q96DD0	335 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	PGLYRP2	Q96PD5	576 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	LGMN	Q99538	433 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	PRDM12	Q9H4Q4	367 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	NSMCE4A	Q9NXX6	385 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	AAR2	Q9Y312	384 aa	Known RBP	11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431	DERA	Q9Y315	318 aa		11.68	□□□□□ -0.54
SIVA1-208	ENST00000556431		A0A0A0MRY4	1105 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	HACD1	B0YJ81	288 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	PRPF4	O43172	522 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	XPA	P23025	273 aa	Predicted RBP	11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	CRABP2	P29373	138 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	MATK	P42679	507 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	ALDH1A3	P47895	512 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	PPM1F	P49593	454 aa	Predicted RBP	11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	NFE2	Q16621	373 aa	Predicted RBP	11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	SPATA13	Q96N96	652 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	MECR	Q9BV79	373 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	7e-8	■□□□□ 10.2
SIVA1-208	ENST00000556431	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	AIM2	O14862	343 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	TOMM70	O94826	608 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	SLC2A3	P11169	496 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	CCR1	P32246	355 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	GEM	P55040	296 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	ZCCHC23	Q6ZST2	131 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	CPT1B	Q92523	772 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	DCDC2	Q9UHG0	476 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	PCDHB7	Q9Y5E2	793 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	SPTLC1	O15269	473 aa		11.67	□□□□□ -0.54
SIVA1-208	ENST00000556431	TIMM44	O43615	452 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms