RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 F9P00740 461 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 LRPAP1P30533 357 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 ARL13BQ3SXY8 428 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 C16orf89Q6UX73 402 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 DEFB107AQ8IZN7 70 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 TSNARE1Q96NA8 513 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 MRGBPQ9NV56 204 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 OXSMQ9NWU1 459 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 RAP2CQ9Y3L5 183 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 KAT6AQ92794 2004 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 ENO4A6NNW6 628 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CABYRO75952 493 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GNAT1P11488 350 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 UQCRBP14927 111 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 PTPN1P18031 435 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 ERCC2P18074 760 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 TKTP29401 623 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 SERPINB6P35237 376 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CSRP3P50461 194 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 TBL3Q12788 808 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 MPP3Q13368 585 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 PRPSAP1Q14558 356 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 HERC3Q15034 1050 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 C11orf91Q3C1V1 193 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 RALGPS1Q5JS13 557 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GLRA4Q5JXX5 417 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CWF19L1Q69YN2 538 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 LINC00523Q86TU6 105 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 RSPH3Q86UC2 560 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 KBTBD6Q86V97 674 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 KLHDC8BQ8IXV7 354 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 ST13P4Q8IZP2 240 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CPSF7Q8N684 471 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 POU5F2Q8N7G0 328 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 SLC26A7Q8TE54 656 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CENPKQ9BS16 269 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 C6orf203Q9P0P8 240 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 FBXW11Q9UKB1 542 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 SLC45A1Q9Y2W3 748 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GOLGA8QA0A0J9YX86 632 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 MBLAC1A4D2B0 266 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 RGSL1A5PLK6 1076 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GOLGA8OA6NCC3 632 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GOLGA8NF8WBI6 632 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 SNAI1O95863 264 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 C2P06681 752 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 ARRB2P32121 409 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 TPI1P60174 286 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 COG7P83436 770 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GALNT2Q10471 571 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 MED21Q13503 144 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CUL3Q13618 768 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 ANO4Q32M45 955 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 RNF220Q5VTB9 566 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 ZYG11AQ6WRX3 759 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 DNAAF3Q8N9W5 541 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 TDRD5Q8NAT2 981 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 RP9Q8TA86 221 aaKnown RBP16.5■□□□□ 0.23
TUBB3-209ENST00000555609 DRC3Q9H069 523 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 CNGB3Q9NQW8 809 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 STK39Q9UEW8 545 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 SLC4A7Q9Y6M7 1214 aa16.5■□□□□ 0.23
TUBB3-209ENST00000555609 GABRDO14764 452 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 HCRTO43612 131 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 EPHB1P54762 984 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 LILRA4P59901 499 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 PRKAA1Q13131 559 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 UGP2Q16851 508 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 LIPMQ5VYY2 423 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 ZFP1Q6P2D0 407 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 ATG14Q6ZNE5 492 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 FRMD7Q6ZUT3 714 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 RAPH1Q70E73 1250 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 CMC1Q7Z7K0 106 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 KCNMB4Q86W47 210 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 PPP1R2P1Q96PQ5 205 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 GPR22Q99680 433 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 GORASP1Q9BQQ3 440 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 PIGVQ9NUD9 493 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 NDUFA13Q9P0J0 144 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 TLK1Q9UKI8 766 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 PDCD11Q14690 1871 aaKnown RBP16.49■□□□□ 0.23
TUBB3-209ENST00000555609 TRIP11Q15643 1979 aa16.49■□□□□ 0.23
TUBB3-209ENST00000555609 F5H423 210 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-209ENST00000555609 MATN2O00339 956 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 HDAC3O15379 428 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 DCXO43602 365 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 AP1G1O43747 822 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 FAM200BP0CF97 657 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 SMPD1P17405 629 aa16.48■□□□□ 0.23
TUBB3-209ENST00000555609 IRF5Q13568 498 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms