RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 EXTL3O43909 919 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 MOSPD3O75425 235 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 RFPL1O75677 317 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 PCDH8O95206 1070 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 TDP2O95551 362 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 CNOT4O95628 575 aaKnown RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 CAVIN2O95810 425 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 AGXTP21549 392 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 APEX1P27695 318 aaKnown RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 CCR2P41597 374 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 NLRP5P59047 1200 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 ROR1Q01973 937 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 FCHO2Q0JRZ9 810 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 TOP3AQ13472 1001 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 ACAP2Q15057 778 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 PTPAQ15257 358 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 NAB2Q15742 525 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 PLK5Q496M5 336 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 SOWAHCQ53LP3 525 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 KANK2Q63ZY3 851 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 TPGS2Q68CL5 300 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 Q6ZS52 159 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 WDR75Q8IWA0 830 aaKnown RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 REXO1L1PQ8IX06 675 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 TTC9BQ8N6N2 239 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 TEKT5Q96M29 485 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 UROC1Q96N76 676 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 EDEM2Q9BV94 578 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 C1QTNF3Q9BXJ4 246 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 KCTD10Q9H3F6 313 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 CYP4F11Q9HBI6 524 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 XPNPEP1Q9NQW7 623 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 C2orf42Q9NWW7 574 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
ATXN3-228ENST00000554592 SLC8A2Q9UPR5 921 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 NEUROG3Q9Y4Z2 214 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 GPR45Q9Y5Y3 372 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 LAMA4Q16363 1823 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 FRYLO94915 3013 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 BCLAF3A2AJT9 711 aaKnown RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SYN3O14994 580 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SLITRK3O94933 977 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ZRANB2O95218 330 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SEC24AO95486 1093 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 MYL4P12829 197 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 OSMP13725 252 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 GLRA2P23416 452 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TKTP29401 623 aaKnown RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 HOXC13P31276 330 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CLCNKBP51801 687 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ARPP19P56211 112 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 LGALS4P56470 323 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CD83Q01151 205 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CREB5Q02930 508 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 GRSF1Q12849 480 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CAPSQ13938 189 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 KRT32Q14532 448 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 PON2Q15165 354 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TEAD2Q15562 447 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ELF2Q15723 593 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 UPP1Q16831 310 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 FAM187BQ17R55 369 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CCDC181Q5TID7 509 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 PPP4R3AQ6IN85 833 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TCEAL6Q6IPX3 200 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 GALNT17Q6IS24 598 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CD300LGQ6UXG3 332 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 C14orf80Q86SX3 495 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 GGNQ86UU5 652 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 MYO1HQ8N1T3 1032 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TCEAL3Q969E4 200 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TCEANC2Q96MN5 208 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SLC2A13Q96QE2 648 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 LXNQ9BS40 222 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SLC26A6Q9BXS9 759 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 RNF26Q9BY78 433 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 PITHD1Q9GZP4 211 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 FZD8Q9H461 694 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 MTG2Q9H4K7 406 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SLC32A1Q9H598 525 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 KCNMB3Q9NPA1 279 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TMEM9BQ9NQ34 198 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ANKEF1Q9NU02 776 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 PRMT7Q9NVM4 692 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 OBP2AQ9NY56 170 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms