RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ZNF578Q96N58 590 aaPredicted RBP8.01□□□□□ -1.13
ABCD4-220ENST00000553998 IRX2Q9BZI1 471 aaPredicted RBP8.01□□□□□ -1.13
ABCD4-220ENST00000553998 CIPCQ9C0C6 399 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 RSPH9Q9H1X1 276 aaPredicted RBP8.01□□□□□ -1.13
ABCD4-220ENST00000553998 AIPL1Q9NZN9 384 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 SUN2Q9UH99 717 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 ADAMTS1Q9UHI8 967 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 NAGPAQ9UK23 515 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 TSPAN16Q9UKR8 245 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 TPX2Q9ULW0 747 aaKnown RBP8.01□□□□□ -1.13
ABCD4-220ENST00000553998 CAPN11Q9UMQ6 739 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 PCDHGC3Q9UN70 934 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 BSNQ9UPA5 3926 aa8.01□□□□□ -1.13
ABCD4-220ENST00000553998 GOLGA6L3A6NEY3 463 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 LRRC53A6NM62 1247 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 XPO1O14980 1071 aaKnown RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 GFPT2O94808 682 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 WISP1O95388 367 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 LSM8O95777 96 aaKnown RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 GYPCP04921 128 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 TPM1P09493 284 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 DLDP09622 509 aaKnown RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 PNMA6AP0CW24 399 aaPredicted RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 C6P13671 934 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 ABCB4P21439 1286 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 GLDCP23378 1020 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 CD38P28907 300 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 KRT9P35527 623 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 PRKCIP41743 596 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 ARRB1P49407 418 aaPredicted RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 CCR5P51681 352 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 GALCP54803 685 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 NXPH1P58417 271 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 E2F1Q01094 437 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 INSM1Q01101 510 aaPredicted RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 SFSWAPQ12872 951 aaKnown RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 ARID5BQ14865 1188 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 PROX2Q3B8N5 592 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 TTC31Q49AM3 519 aaPredicted RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 RAB41Q5JT25 222 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 SLC47A2Q86VL8 602 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 CACUL1Q86Y37 369 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 DENND1CQ8IV53 801 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 EID2Q8N6I1 236 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 KDM1BQ8NB78 822 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 EPS8L1Q8TE68 723 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 DDI1Q8WTU0 396 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 STK32AQ8WU08 396 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 KCTD13Q8WZ19 329 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 MYO19Q96H55 970 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 SLC6A18Q96N87 628 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 ZSWIM1Q9BR11 485 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 SEMA4CQ9C0C4 833 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 PABPC3Q9H361 631 aaKnown RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 GDF3Q9NR23 364 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 CLCA2Q9UQC9 943 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 NCKAP1Q9Y2A7 1128 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 LUC7L2Q9Y383 392 aaKnown RBP8□□□□□ -1.13
ABCD4-220ENST00000553998 CEP83Q9Y592 693 aa8□□□□□ -1.13
ABCD4-220ENST00000553998 M0QYV0 167 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TLR4O00206 839 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 WNT9AO14904 365 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 LATS1O95835 1130 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ATP5BP06576 529 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CDC25BP30305 580 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 HNRNPH3P31942 346 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CDH5P33151 784 aaPredicted RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 GPD2P43304 727 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ACADSBP45954 432 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 RPL34P49207 117 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TMPRSS3P57727 454 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 SNX16P57768 344 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CDR2Q01850 454 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ARID5AQ03989 594 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 SRSF1Q07955 248 aaKnown RBP eCLIP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CCDC173Q0VFZ6 552 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 EFEMP1Q12805 493 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 BNIP3Q12983 259 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ASIC2Q16515 512 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 FNDC3BQ53EP0 1204 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TAF1BQ53T94 588 aaPredicted RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 MPP7Q5T2T1 576 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CDCP2Q5VXM1 449 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ZNF776Q68DI1 518 aaPredicted RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 PM20D1Q6GTS8 502 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TRIM72Q6ZMU5 477 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CHST9Q7L1S5 443 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 IRF2BP2Q7Z5L9 587 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 NOP9Q86U38 636 aaKnown RBP7.99□□□□□ -1.13
ABCD4-220ENST00000553998 PIGZQ86VD9 579 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 CNGA4Q8IV77 575 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 DRC7Q8IY82 874 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 LSMEM2Q8N112 164 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 AHI1Q8N157 1196 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 SCML4Q8N228 414 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 ARHGAP18Q8N392 663 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 OXR1Q8N573 874 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 FAM181AQ8N9Y4 354 aa7.99□□□□□ -1.13
ABCD4-220ENST00000553998 TMEM35BQ8NCS4 154 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms