RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SRPRAP08240 638 aaKnown RBP23.1■■□□□ 1.29
BRF1-216ENST00000550208 HTR7P34969 479 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 ACVRL1P37023 503 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 STK19P49842 368 aaPredicted RBP23.1■■□□□ 1.29
BRF1-216ENST00000550208 ST8SIA6P61647 398 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 GNA12Q03113 381 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 SULT2A1Q06520 285 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 DPYSL2Q16555 572 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 ANO7Q6IWH7 933 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 ZNF783Q6ZMS7 281 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 DESI2Q9BSY9 194 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 LACRTQ9GZZ8 138 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.1■■□□□ 1.29
BRF1-216ENST00000550208 EBF1Q9UH73 591 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 SALL4Q9UJQ4 1053 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 DUSP10Q9Y6W6 482 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 R4GN57 208 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 TTC34A8MYJ7 566 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 DAPK3O43293 454 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 GLDCP23378 1020 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 GJC1P36383 396 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 HCAR3P49019 387 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 HADHBP55084 474 aaKnown RBP23.09■■□□□ 1.29
BRF1-216ENST00000550208 RFX8Q6ZV50 586 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 WDR5BQ86VZ2 330 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 LONP2Q86WA8 852 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 RASSF3Q86WH2 238 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 ZBTB44Q8NCP5 570 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 HMGB4Q8WW32 186 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 ARHGEF2Q92974 986 aaKnown RBP23.09■■□□□ 1.29
BRF1-216ENST00000550208 NOL6Q9H6R4 1146 aaKnown RBP23.09■■□□□ 1.29
BRF1-216ENST00000550208 PCDH18Q9HCL0 1135 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 SUN2Q9UH99 717 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 HYOU1Q9Y4L1 999 aa23.09■■□□□ 1.29
BRF1-216ENST00000550208 ARIH1Q9Y4X5 557 aaPredicted RBP23.09■■□□□ 1.29
BRF1-216ENST00000550208 A0A0A6YYK5 440 aaPredicted RBP23.08■■□□□ 1.29
BRF1-216ENST00000550208 AXIN1O15169 862 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 FGF10O15520 208 aaPredicted RBP23.08■■□□□ 1.29
BRF1-216ENST00000550208 SYNCRIPO60506 623 aaKnown RBP23.08■■□□□ 1.29
BRF1-216ENST00000550208 ALDH1A2O94788 518 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 ERCC2P18074 760 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 GABRG2P18507 467 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 VAV2P52735 878 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 KRT83P78385 493 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 STARD3Q14849 445 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 POLNQ7Z5Q5 900 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 KIAA1328Q86T90 577 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 LRRC8AQ8IWT6 810 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 PGBD3Q8N328 593 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 KDM1BQ8NB78 822 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 MDGA1Q8NFP4 955 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 ATRIPQ8WXE1 791 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 SLC6A17Q9H1V8 727 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 MAGEH1Q9H213 219 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 ATP13A1Q9HD20 1204 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 VPS51Q9UID3 782 aa23.08■■□□□ 1.29
BRF1-216ENST00000550208 MUC6Q6W4X9 2439 aa23.08■■□□□ 1.28
BRF1-216ENST00000550208 A0A0U1RQJ8 604 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 H3BRJ5 948 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 PJA2O43164 708 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 HRO43593 1189 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 BUB1O43683 1085 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 BUB1BO60566 1050 aaPredicted RBP23.07■■□□□ 1.28
BRF1-216ENST00000550208 ZMPSTE24O75844 475 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 MT-CO1P00395 513 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 COMTP21964 271 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 AMPD1P23109 780 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 ARSEP51690 589 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 ZNF135P52742 658 aaPredicted RBP23.07■■□□□ 1.28
BRF1-216ENST00000550208 CDH6P55285 790 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 POLD3Q15054 466 aaPredicted RBP23.07■■□□□ 1.28
BRF1-216ENST00000550208 IL31Q6EBC2 164 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 DCAF4L2Q8NA75 395 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 C2orf49Q9BVC5 232 aaPredicted RBP23.07■■□□□ 1.28
BRF1-216ENST00000550208 ACE2Q9BYF1 805 aaPredicted RBP23.07■■□□□ 1.28
BRF1-216ENST00000550208 TPSD1Q9BZJ3 242 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 PRSS16Q9NQE7 514 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 BCCIPQ9P287 314 aaKnown RBP eCLIP23.07■■□□□ 1.28
BRF1-216ENST00000550208 SLC25A13Q9UJS0 675 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 PCDHGA2Q9Y5H1 932 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 ALG6Q9Y672 507 aa23.07■■□□□ 1.28
BRF1-216ENST00000550208 CACNA1HO95180 2353 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 CCDC163A0A0D9SF12 145 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 CBX4O00257 560 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 RAMP2O60895 175 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 LILRB5O75023 590 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 CD48P09326 243 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 IL4RP24394 825 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 NNMTP40261 264 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 ARL4AP40617 200 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 SLC1A1P43005 524 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 NHLH1Q02575 133 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 MMRN1Q13201 1228 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 SRSF5Q13243 272 aaKnown RBP23.06■■□□□ 1.28
BRF1-216ENST00000550208 CAMK2GQ13555 558 aaPredicted RBP23.06■■□□□ 1.28
BRF1-216ENST00000550208 DPYSQ14117 519 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 KRT81Q14533 505 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 LINGO4Q6UY18 593 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 UMODL1-AS1Q8N2C9 162 aa23.06■■□□□ 1.28
BRF1-216ENST00000550208 KCTD6Q8NC69 237 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms