RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 ZNF853P0CG23 659 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 U2AF2P26368 475 aaKnown RBP eCLIP4.44□□□□□ -1.72e-13■□□□□ 9.1
MDM2-229ENST00000543046 SERPINA4P29622 427 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 RCAN1P53805 252 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 HNRNPH2P55795 449 aaKnown RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 SRSF1Q07955 248 aaKnown RBP eCLIP4.44□□□□□ -1.7
MDM2-229ENST00000543046 MTX1Q13505 466 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 PDCD2Q16342 344 aaPredicted RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 TIGD6Q17RP2 521 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 GALNTL6Q49A17 601 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 CCDC91Q7Z6B0 441 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 PIP4P1Q86T03 277 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 HSCBQ8IWL3 235 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 SUGP1Q8IWZ8 645 aaKnown RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 MYCT1Q8N699 235 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 ATP2A3Q93084 1043 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 ZFYVE19Q96K21 471 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 ZNF48Q96MX3 618 aaPredicted RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 TRAPPC9Q96Q05 1148 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 PIMREGQ9BSJ6 248 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 TRMOQ9BU70 441 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 TUBB6Q9BUF5 446 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 DDX23Q9BUQ8 820 aaKnown RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 PTPRHQ9HD43 1115 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 TERF2IPQ9NYB0 399 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 NDUFAF4Q9P032 175 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 RSPH14Q9UHP6 348 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 SLC8A2Q9UPR5 921 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.44□□□□□ -1.7
MDM2-229ENST00000543046 PCDHA10Q9Y5I2 948 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 WIZO95785 1651 aa4.44□□□□□ -1.7
MDM2-229ENST00000543046 RAPGEF2Q9Y4G8 1499 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 KIF15Q9NS87 1388 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 TOP2AP11388 1531 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 TRBV5-3A0A0A0MS03 114 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 CCDC196A0A1B0GTZ2 297 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 hCG_1642624A0A1W2PR95 340 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 CCDC189A1A4V9 331 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 HMX3A6NHT5 357 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 IPO5O00410 1097 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 NR4A2P43354 598 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 B4GALNT1Q00973 533 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 ZRSR2Q15696 482 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 MIDNQ504T8 468 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 KIAA1755Q5JYT7 1200 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 JMJD6Q6NYC1 403 aaPredicted RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 RINLQ6ZS11 566 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 NRACQ8N912 160 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 FAM184AQ8NB25 1140 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 KIF18AQ8NI77 898 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 SLC2A12Q8TD20 617 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 KIF1BPQ96EK5 621 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 ADAD1Q96M93 576 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 FAM210AQ96ND0 272 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 TXNRD2Q9NNW7 524 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 CWC15Q9P013 229 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 SRP68Q9UHB9 627 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 AGO2Q9UKV8 859 aaKnown RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 V9GYY5 206 aaPredicted RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 YEATS2Q9ULM3 1422 aa4.43□□□□□ -1.7
MDM2-229ENST00000543046 ZNF335Q9H4Z2 1342 aaPredicted RBP4.43□□□□□ -1.7
MDM2-229ENST00000543046 LY6G6EA0A0G2JKS1 128 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 KIR2DS5A0A0G2JLQ3 304 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 A0A1B0GUL7 405 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 HFM1A2PYH4 1435 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 DPPA5A6NC42 116 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 MCIDASD6RGH6 385 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 H0Y3Z8 333 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 KIR2DS3K7RE56 304 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 ATP8B1O43520 1251 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 TLX3O43711 291 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 TCEA3O75764 348 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 WNT1P04628 370 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 CYP21A2P08686 494 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 TMEM191BP0C7N4 346 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 NEFHP12036 1026 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 CST5P28325 142 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 PCP4P48539 62 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 PRKAA2P54646 552 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 ADPRHP54922 357 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 NUCB2P80303 420 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 LAMB3Q13751 1172 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 ZSCAN23Q3MJ62 389 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 HSP90AB4PQ58FF6 505 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 DGAT2L7PQ6IED9 249 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 CAVIN1Q6NZI2 390 aaKnown RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 TMED8Q6PL24 325 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 CASC1Q6TDU7 716 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 KIAA1324Q6UXG2 1013 aaKnown RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 LRIG3Q6UXM1 1119 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 MDGA2Q7Z553 956 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 NBPF5PQ86XG9 351 aaPredicted RBP4.42□□□□□ -1.7
MDM2-229ENST00000543046 OTUD6BQ8N6M0 293 aa4.42□□□□□ -1.7
MDM2-229ENST00000543046 ARFGAP1Q8N6T3 406 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms