RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PNPLA8Q9NP80 782 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 TRNAU1APQ9NX07 287 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 C6orf203Q9P0P8 240 aaPredicted RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 ITM2BQ9Y287 266 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 DNAJC16Q9Y2G8 782 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 AP4B1Q9Y6B7 739 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ASCC3Q8N3C0 2202 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 ICE1Q9Y2F5 2266 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 PLXNA1Q9UIW2 1896 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 FUCA1P04066 466 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ACO1P21399 889 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 TCEA1P23193 301 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 NPTX2P47972 431 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 SOX10P56693 466 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 EIF3EP60228 445 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 IL1RL1Q01638 556 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 OGDHQ02218 1023 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 TAP1Q03518 808 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 RELAQ04206 551 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ENPEPQ07075 957 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 DPYSL3Q14195 570 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 TGFBIQ15582 683 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 DGKDQ16760 1214 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 TREML2Q5T2D2 321 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 THOC7Q6I9Y2 204 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 JADE1Q6IE81 842 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 MIB1Q86YT6 1006 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 HPS6Q86YV9 775 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 GPC2Q8N158 579 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 FBXW8Q8N3Y1 598 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 AFAP1L2Q8N4X5 818 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 FAM71DQ8N9W8 422 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 RMDN1Q96DB5 314 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CMTM5Q96DZ9 223 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CNBD2Q96M20 576 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 PRPF18Q99633 342 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 PDCD2LQ9BRP1 358 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 SETD4Q9NVD3 440 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 MAP3K20Q9NYL2 800 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 TLK1Q9UKI8 766 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 N6AMT1Q9Y5N5 214 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 TEX264Q9Y6I9 313 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 SCN4AP35499 1836 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 H3BNX3 289 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 J3QRK9 145 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 DNAJA2O60884 412 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 TRMUO75648 421 aaKnown RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 MAP3K6O95382 1288 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 SLC25A27O95847 323 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 FAM58BPP0C7Q3 252 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 ITGAXP20702 1163 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 MMP8P22894 467 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 NKX2-5P52952 324 aaPredicted RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 ACTR2P61160 394 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 PPIDQ08752 370 aaKnown RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 LRP8Q14114 963 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 LPIN1Q14693 890 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 ADRM1Q16186 407 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 SMTNL2Q2TAL5 461 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 DEFB115Q30KQ5 88 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 PDPK2PQ6A1A2 396 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 SLC39A4Q6P5W5 647 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 C15orf39Q6ZRI6 1047 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 POLNQ7Z5Q5 900 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 VSIG10LQ86VR7 867 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 RNF135Q8IUD6 432 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 SPATA2LQ8IUW3 424 aaPredicted RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 NDUFAF2Q8N183 169 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 TRAPPC12Q8WVT3 735 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 FBXL8Q96CD0 374 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 FAF2Q96CS3 445 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 PABPC5Q96DU9 382 aaKnown RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 LRGUKQ96M69 825 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 OSMRQ99650 979 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 C20orf27Q9GZN8 174 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 CACYBPQ9HB71 228 aaKnown RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 ATAD3AQ9NVI7 634 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 FAF1Q9UNN5 650 aaPredicted RBP5.34□□□□□ -1.56
PROM1-220ENST00000540805 GPSM3Q9Y4H4 160 aa5.34□□□□□ -1.56
PROM1-220ENST00000540805 A0A0B4J269 797 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 SCAMP3O14828 347 aaKnown RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 SIN3BO75182 1162 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 RFPL1O75677 317 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 CRTAMO95727 393 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 PGK1P00558 417 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 KRT7P08729 469 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZNF286BP0CG31 522 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 RBP3P10745 1247 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 GARTP22102 1010 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 TBXAS1P24557 533 aaPredicted RBP5.33□□□□□ -1.56
PROM1-220ENST00000540805 L1CAMP32004 1257 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 NR1H2P55055 460 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 BEX3Q00994 111 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 NSUN2Q08J23 767 aaKnown RBP eCLIP5.33□□□□□ -1.56
PROM1-220ENST00000540805 TUBB3Q13509 450 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 SF3B4Q15427 424 aaKnown RBP eCLIP5.33□□□□□ -1.56
PROM1-220ENST00000540805 ZACNQ401N2 412 aa5.33□□□□□ -1.56
PROM1-220ENST00000540805 GJC2Q5T442 439 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms