RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ATXN7L1Q9ULK2 861 aaPredicted RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 FRMD4BQ9Y2L6 1034 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 FLNCQ14315 2725 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 USP9XQ93008 2570 aaPredicted RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 XPO1O14980 1071 aaKnown RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 LZTS3O60299 673 aaPredicted RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 NR3C1P04150 777 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 TRIM49P0CI25 452 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 TRIM49CP0CI26 452 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 SFTPCP11686 197 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 LCP1P13796 627 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 VAMP7P51809 220 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 RAD23BP54727 409 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 INHBCP55103 352 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 AGBL4Q5VU57 503 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 ARHGAP17Q68EM7 881 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 GUSBP11Q6P575 273 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 DSG4Q86SJ6 1040 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 CLEC14AQ86T13 490 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 SLC9A9Q8IVB4 645 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 OR13H1Q8NG92 308 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 FAM131CQ96AQ9 280 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 NUCKS1Q9H1E3 243 aaKnown RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 SYNDIG1Q9H7V2 258 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 TSPAN16Q9UKR8 245 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 SARDHQ9UL12 918 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 NYNRINQ9P2P1 1898 aaKnown RBP11.5□□□□□ -0.57
CLPB-208ENST00000538021 KIF26BQ2KJY2 2108 aa11.5□□□□□ -0.57
CLPB-208ENST00000538021 A0A1W2PQU0 124 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 C1QTNF3-AMACRE9PGA6 284 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 MOCS2O96007 188 aaPredicted RBP11.49□□□□□ -0.57
CLPB-208ENST00000538021 IGLV3-27P01718 113 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 ITGB2P05107 769 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 ZNF18P17022 549 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 AKT2P31751 481 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 AFMP43652 599 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 CLDN2P57739 230 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 HNRNPKP61978 463 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLPB-208ENST00000538021 PPP3CAQ08209 521 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 SRSF6Q13247 344 aaKnown RBP11.49□□□□□ -0.57
CLPB-208ENST00000538021 STK38Q15208 465 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 TGIF1Q15583 401 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 MS4A13Q5J8X5 152 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 ZCCHC8Q6NZY4 707 aaKnown RBP11.49□□□□□ -0.57
CLPB-208ENST00000538021 SLC22A18ASQ8N1D0 253 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 UBA3Q8TBC4 463 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 NOX5Q96PH1 765 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 PREBQ9HCU5 417 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 HESX1Q9UBX0 185 aa11.49□□□□□ -0.57
CLPB-208ENST00000538021 CCDC187A0A096LP49 1063 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 PVALEFA0A1B0GWK0 134 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 EME2A4GXA9 379 aaPredicted RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 PIK3R2O00459 728 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 BNIP3LO60238 219 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 PPFIA2O75334 1257 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 TCEA3O75764 348 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 ITGA2BP08514 1039 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 CD19P15391 556 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 HNRNPA2B1P22626 353 aaKnown RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 MLLT3P42568 568 aaPredicted RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 DAOAP59103 153 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 NUCB2P80303 420 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 BST2Q10589 180 aaKnown RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 CUL4BQ13620 913 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 DRAP1Q14919 205 aaPredicted RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 OR6B2Q6IFH4 312 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 MSANTD2Q6P1R3 559 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 Q6ZSR6 202 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 C14orf80Q86SX3 495 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 ZNF548Q8NEK5 533 aaPredicted RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
CLPB-208ENST00000538021 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
CLPB-208ENST00000538021 TLN1Q9Y490 2541 aaKnown RBP11.47□□□□□ -0.57
CLPB-208ENST00000538021 COL27A1Q8IZC6 1860 aaPredicted RBP11.47□□□□□ -0.57
CLPB-208ENST00000538021 MUSKO15146 869 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 SPTLC2O15270 562 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 POLR2DO15514 142 aaKnown RBP11.47□□□□□ -0.57
CLPB-208ENST00000538021 PDIA4P13667 645 aaKnown RBP11.47□□□□□ -0.57
CLPB-208ENST00000538021 PDGFRAP16234 1089 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 CR2P20023 1033 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 PDCP20941 246 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 SLC5A2P31639 672 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 RGS7P49802 495 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 TAS2R38P59533 333 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
CLPB-208ENST00000538021 STK4Q13043 487 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms