RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ACBD5Q5T8D3 534 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 KLC3Q6P597 504 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 NAPRTQ6XQN6 538 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 RNF168Q8IYW5 571 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 ZFP28Q8NHY6 868 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 HSPBAP1Q96EW2 488 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 C1orf21Q9H246 121 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 EMCNQ9ULC0 261 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 HDAC3O15379 428 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 KCTD2Q14681 263 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 DLK2Q6UY11 383 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 SH2D5Q6ZV89 423 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 SLC41A1Q8IVJ1 513 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 PAF1Q8N7H5 531 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 SLC2A14Q8TDB8 520 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 DPEP3Q9H4B8 488 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 COMMD10Q9Y6G5 202 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 ZNF839A8K0R7 811 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 KCNU1A8MYU2 1149 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 PMPCBO75439 489 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 ADIGQ0VDE8 80 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 DCTN2Q13561 401 aaKnown RBP16.21■□□□□ 0.19
MCF2L-232ENST00000535094 MYLK3Q32MK0 819 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 PDZD4Q76G19 769 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-232ENST00000535094 MAVSQ7Z434 540 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 IFT43Q96FT9 208 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 SIKE1Q9BRV8 207 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 ZNF670Q9BS34 389 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 NOL11Q9H8H0 719 aaKnown RBP16.21■□□□□ 0.19
MCF2L-232ENST00000535094 DOLKQ9UPQ8 538 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 SF3B1O75533 1304 aaKnown RBP eCLIP16.21■□□□□ 0.19
MCF2L-232ENST00000535094 ADGRA2Q96PE1 1338 aa16.21■□□□□ 0.19
MCF2L-232ENST00000535094 IRF6O14896 467 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 VAPBO95292 243 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 CKMT2P17540 419 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 PTPRAP18433 802 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 IL4RP24394 825 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 AKAP5P24588 427 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 TPP2P29144 1249 aaPredicted RBP16.21■□□□□ 0.18
MCF2L-232ENST00000535094 STX1BP61266 288 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 CSHL1Q14406 222 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 TTC33Q6PID6 262 aaPredicted RBP16.21■□□□□ 0.18
MCF2L-232ENST00000535094 LRTOMTQ8WZ04 291 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 VPS39Q96JC1 886 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 RTKNQ9BST9 563 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 DDX43Q9NXZ2 648 aaKnown RBP16.21■□□□□ 0.18
MCF2L-232ENST00000535094 SNTG2Q9NY99 539 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 C6orf203Q9P0P8 240 aaPredicted RBP16.21■□□□□ 0.18
MCF2L-232ENST00000535094 DNAJB4Q9UDY4 337 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 PPME1Q9Y570 386 aa16.21■□□□□ 0.18
MCF2L-232ENST00000535094 KIF13BQ9NQT8 1826 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 FAM149AA5PLN7 773 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 PPEF2O14830 753 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 B4GALT4O60513 344 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TRMUO75648 421 aaKnown RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TNFAIP2Q03169 654 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 CCDC153Q494R4 210 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 METTL7BQ6UX53 244 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TTC30AQ86WT1 665 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 AFAP1L2Q8N4X5 818 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TMEM174Q8WUU8 243 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 PNPLA8Q9NP80 782 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 PRMT7Q9NVM4 692 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 DNAAF2Q9NVR5 837 aaKnown RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 UBAP1Q9NZ09 502 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 STK39Q9UEW8 545 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 MID2Q9UJV3 735 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 ITGBL1O95965 494 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 PIGRP01833 764 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 INSRRP14616 1297 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 RPL10P27635 214 aaKnown RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 C16orf87Q6PH81 154 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TRIM74Q86UV6 250 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TRIM73Q86UV7 250 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 APBB2Q92870 758 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 CNDP1Q96KN2 507 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 PCYT2Q99447 389 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 CPNE1Q99829 537 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 PAIP1Q9H074 479 aaKnown RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 LMCD1Q9NZU5 365 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 AP4S1Q9Y587 144 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 A0A1B0GTW7 788 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 TIPRLO75663 272 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 L1CAMP32004 1257 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 CDH5P33151 784 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-232ENST00000535094 GRTP1Q5TC63 336 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 IL23RQ5VWK5 629 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 ACMSDQ8TDX5 336 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 OTUD5Q96G74 571 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 SLC39A3Q9BRY0 314 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 DNAJC28Q9NX36 388 aa16.2■□□□□ 0.18
MCF2L-232ENST00000535094 INHBCP55103 352 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 MS4A2Q01362 244 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 SOWAHAQ2M3V2 549 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 RNF169Q8NCN4 708 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 OR6P1Q8NGX9 317 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms