RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SNX11Q9Y5W9 270 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 SLCO1B1Q9Y6L6 691 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 CHD5Q8TDI0 1954 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 TARSL2A2RTX5 802 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC28A2O43868 658 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 HSF2BPO75031 334 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SIN3BO75182 1162 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC2A3P11169 496 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 CCT8P50990 548 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 AFF3P51826 1226 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 CDK17Q00537 523 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 ECT2LQ008S8 904 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 IL9RQ01113 521 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC6A3Q01959 620 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 TLE3Q04726 772 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 TARDBPQ13148 414 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC12A1Q13621 1099 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 TEAD4Q15561 434 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 INAVAQ3KP66 663 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 ARTNQ5T4W7 220 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 KLHDC7AQ5VTJ3 777 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 OTUD1Q5VV17 481 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 ZNF776Q68DI1 518 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 CXorf57Q6NSI4 855 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 FBXL22Q6P050 247 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 USP30Q70CQ3 517 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 CHSY1Q86X52 802 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 CACUL1Q86Y37 369 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 FAM114A1Q8IWE2 563 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SPACA3Q8IXA5 215 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 C1orf131Q8NDD1 294 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 PTPRN2Q92932 1015 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 NT5C3BQ969T7 300 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 FAM129BQ96TA1 746 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SEMA4CQ9C0C4 833 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 BTBD1Q9H0C5 482 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SGK2Q9HBY8 427 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SAMSN1Q9NSI8 373 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 LMBRD1Q9NUN5 540 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 SCML1Q9UN30 329 aa10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-203ENST00000534830 PIEZO2Q9H5I5 2752 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 A0A1B0GVM2 712 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 TCAF2A6NFQ2 919 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 TTC34A8MYJ7 566 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 F5H5T6 163 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 PCDHGA12O60330 932 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 DAB1O75553 588 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 GRAP2O75791 330 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 SEMA4FO95754 770 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 DNTTP04053 509 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ABCB4P21439 1286 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 CCR1P32246 355 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 NOS2P35228 1153 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 KRT9P35527 623 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 SCNN1AP37088 669 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 BPIFB4P59827 614 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ST8SIA6P61647 398 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 RHDQ02161 417 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 SRSF1Q07955 248 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 MTA1Q13330 715 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 CDH18Q13634 790 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 LY6DQ14210 128 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 DRAP1Q14919 205 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 RTP5Q14D33 572 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 TTC39BQ5VTQ0 682 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 OR6B2Q6IFH4 312 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 RBM43Q6ZSC3 357 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 BNIPLQ7Z465 357 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 FAM124AQ86V42 546 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ZDHHC17Q8IUH5 632 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 CCAR2Q8N163 923 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 OR52K2Q8NGK3 314 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 FRS2Q8WU20 508 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 IGSF8Q969P0 613 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 FAM131CQ96AQ9 280 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 BIRC7Q96CA5 298 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 PGAP3Q96FM1 320 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 NAF1Q96HR8 494 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 NPY6RQ99463 290 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 LGMNQ99538 433 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 NRSN2Q9GZP1 204 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 NUP62CLQ9H1M0 184 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 PABPC3Q9H361 631 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 PLCB1Q9NQ66 1216 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ANLNQ9NQW6 1124 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 DDIT4Q9NX09 232 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ARHGEF38Q9NXL2 777 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 SERGEFQ9UGK8 458 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ADAMTS1Q9UHI8 967 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC12A6Q9UHW9 1150 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 SLCO3A1Q9UIG8 710 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 ANKRD6Q9Y2G4 727 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 OR51B4Q9Y5P0 310 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
CLSTN3-203ENST00000534830 EDDM13A0A1B0GTR0 161 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms