RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 CASP10Q92851 521 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 TOP1MTQ969P6 601 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 PLD4Q96BZ4 506 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 IGSF21Q96ID5 467 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 SEC16BQ96JE7 1060 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 MYRFLQ96LU7 910 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 HERC2P3Q9BVR0 1158 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 TMEM39AQ9NV64 488 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 MARCH2Q9P0N8 246 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 DNMT3LQ9UJW3 386 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 STARD13Q9Y3M8 1113 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 ASB3Q9Y575 518 aa12.56□□□□□ -0.4
CHD7-211ENST00000532149 FNDC1Q4ZHG4 1894 aaPredicted RBP12.56□□□□□ -0.4
CHD7-211ENST00000532149 KLF11O14901 512 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 ATP5BP06576 529 aaKnown RBP12.55□□□□□ -0.4
CHD7-211ENST00000532149 CLTBP09497 229 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 PSMB4P28070 264 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 ALDH3A1P30838 453 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 ALDH1A3P47895 512 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 SLC11A2P49281 568 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 HARS2P49590 506 aaKnown RBP12.55□□□□□ -0.4
CHD7-211ENST00000532149 SEC24CP53992 1094 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 DSG1Q02413 1049 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 PSMD5Q16401 504 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 DDR2Q16832 855 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 SPDYAQ5MJ70 313 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 FBXO46Q6PJ61 603 aaPredicted RBP12.55□□□□□ -0.4
CHD7-211ENST00000532149 KYAT3Q6YP21 454 aaKnown RBP12.55□□□□□ -0.4
CHD7-211ENST00000532149 CCDC121Q6ZUS5 278 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 ZNF534Q76KX8 674 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 NLRP9Q7RTR0 991 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 CCDC91Q7Z6B0 441 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 TMEM135Q86UB9 458 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 CTAGE3PQ8IX95 158 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 LMNTD2Q8IXW0 634 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 OTUD6BQ8N6M0 293 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 LRRC8CQ8TDW0 803 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 MZB1Q8WU39 189 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 PEX13Q92968 403 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 TMEM169Q96HH4 297 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 APOPT1Q96IL0 206 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 TGS1Q96RS0 853 aaKnown RBP12.55□□□□□ -0.4
CHD7-211ENST00000532149 CPNE1Q99829 537 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 RHOBTB2Q9BYZ6 727 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 SIK2Q9H0K1 926 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 NMUR1Q9HB89 426 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 SEPT10Q9P0V9 454 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 DCDC2Q9UHG0 476 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 VANGL2Q9ULK5 521 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 TTLL3Q9Y4R7 772 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 HS3ST4Q9Y661 456 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 MICAL3Q7RTP6 2002 aa12.55□□□□□ -0.4
CHD7-211ENST00000532149 SLC38A8A6NNN8 435 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 BIRC5O15392 142 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 TIMM44O43615 452 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 B4GALT3O60512 393 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 MAFKO60675 156 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 LPXNO60711 386 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 ABLIM3O94929 683 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 GSTA1P08263 222 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 PAMP19021 973 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 SPRP35270 261 aaPredicted RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 GJA8P48165 433 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 CDK18Q07002 472 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 TAF10Q12962 218 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 MTFR1Q15390 333 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 RABGAP1LQ5R372 815 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 C10orf120Q5SQS8 335 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 FYB2Q5VWT5 728 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 CASC4Q6P4E1 433 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 ZNF783Q6ZMS7 281 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 SRLQ86TD4 932 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 ITIH5Q86UX2 942 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 TMEM199Q8N511 208 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 DNAAF3Q8N9W5 541 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 SREK1Q8WXA9 508 aaKnown RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 SCG3Q8WXD2 468 aaKnown RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 ARMC5Q96C12 935 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 CFAP36Q96G28 342 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 PITPNM3Q9BZ71 974 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 ARNT2Q9HBZ2 717 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 GLOD4Q9HC38 313 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 SPG21Q9NZD8 308 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 TRPM5Q9NZQ8 1165 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 GMIPQ9P107 970 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms