RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
NXF1-211ENST00000531709 GPAMQ9HCL2 828 aa11.57□□□□□ -0.56
NXF1-211ENST00000531709 STMN1P16949 149 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 TSPAN8P19075 237 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 ME2P23368 584 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 EEF1B2P24534 225 aaKnown RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 CCR10P46092 362 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 GRIK4Q16099 956 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 SLC5A9Q2M3M2 681 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 MBLAC2Q68D91 279 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 NAPEPLDQ6IQ20 393 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 RBM44Q6ZP01 1051 aaKnown RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 ZDHHC17Q8IUH5 632 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 DDIASQ8IXT1 998 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 SNX31Q8N9S9 440 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 GATA5Q9BWX5 397 aaPredicted RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 THEGQ9P2T0 379 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 V9GYQ6 96 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 A0A088AWK7 358 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 DDHD2O94830 711 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 CD4P01730 458 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 USP17L7P0C7H9 530 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 PAMP19021 973 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 CCNFP41002 786 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 KPNA2P52292 529 aaKnown RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 ARHGAP22Q7Z5H3 698 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 SLC41A1Q8IVJ1 513 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 PLD6Q8N2A8 252 aaKnown RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 PQLC1Q8N2U9 271 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 SHKBP1Q8TBC3 707 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 GORASP1Q9BQQ3 440 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 PNPLA8Q9NP80 782 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 RGSL1A5PLK6 1076 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 HACD1B0YJ81 288 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 HDAC3O15379 428 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 FGF3P11487 239 aaPredicted RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 IL4RP24394 825 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 MATKP42679 507 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 GHRHRQ02643 423 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 ZNF460Q14592 562 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 PCLAFQ15004 111 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 ARL13AQ5H913 290 aaPredicted RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 ATPAF2Q8N5M1 289 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 UBR7Q8N806 425 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.56□□□□□ -0.56
NXF1-211ENST00000531709 CATSPER1Q8NEC5 780 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
NXF1-211ENST00000531709 ULBP1Q9BZM6 244 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 TRPC7Q9HCX4 862 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 ARHGEF38Q9NXL2 777 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
NXF1-211ENST00000531709 ATP6AP2A0A1C7CYW4 349 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 STX16-NPEPL1H3BU86 382 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 M0QZ92 97 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 ATP6AP2O75787 350 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 SUPT7LO94864 414 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 PSMC3P17980 439 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 CYP3A5P20815 502 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 PRKAA1Q13131 559 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 ARMC3Q5W041 872 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 NCBP2-AS2Q69YL0 99 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 SLC9A4Q6AI14 798 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 SCN4BQ8IWT1 228 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 DSELQ8IZU8 1212 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 PPHLN1Q8NEY8 458 aaKnown RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 DNAJC1Q96KC8 554 aaKnown RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 EIF2AQ9BY44 585 aaKnown RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 DMAP1Q9NPF5 467 aaPredicted RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 NUDT5Q9UKK9 219 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 ADAMTS6Q9UKP5 1117 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 LZTS1Q9Y250 596 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 AP4B1Q9Y6B7 739 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 ATP5BP06576 529 aaKnown RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 MYL4P12829 197 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 VAV1P15498 845 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 YBX3P16989 372 aaKnown RBP eCLIP11.55□□□□□ -0.563e-8■□□□□ 10.5
NXF1-211ENST00000531709 AOC1P19801 751 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 ITGAXP20702 1163 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 PLOD1Q02809 727 aaPredicted RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 SEMA5AQ13591 1074 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 UGP2Q16851 508 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 FAM83EQ2M2I3 478 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 C6orf52Q5T4I8 152 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 TP53INP2Q8IXH6 220 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 NUP93Q8N1F7 819 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 PABPC5Q96DU9 382 aaKnown RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.55□□□□□ -0.56
NXF1-211ENST00000531709 CNTN3Q9P232 1028 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 SNX10Q9Y5X0 201 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 SLX4Q8IY92 1834 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 LTFP02788 710 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 MPOP05164 745 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 MYL3P08590 195 aa11.55□□□□□ -0.56
NXF1-211ENST00000531709 TFEBP19484 476 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms