RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TNIP2Q8NFZ5 429 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 ZUFSPQ96AP4 578 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 FAM20AQ96MK3 541 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 HSD17B14Q9BPX1 270 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 CLSTN3Q9BQT9 956 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 FANCEQ9HB96 536 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 WRAP73Q9P2S5 460 aaPredicted RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 PSME2Q9UL46 239 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TCAF1Q9Y4C2 921 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 NUAK1O60285 661 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TMEM191BP0C7N4 346 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 EPHX2P34913 555 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 ZNF76P36508 570 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 GABRB2P47870 512 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 ZNF252P-AS1Q0IIN9 211 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TRPC3Q13507 836 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 SPCS2Q15005 226 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 KCNT1Q5JUK3 1230 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 FAXCQ5TGI0 409 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 ESX1Q8N693 406 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 PCDH20Q8N6Y1 951 aaKnown RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 NAT16Q8N8M0 369 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TERB1Q8NA31 727 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TP53INP1Q96A56 240 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 CDK5RAP1Q96SZ6 601 aaKnown RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 ADI1Q9BV57 179 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 EPS8L2Q9H6S3 715 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 HSPBP1Q9NZL4 362 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TRPC5Q9UL62 973 aaPredicted RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 AP4E1Q9UPM8 1137 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 AGTPBP1Q9UPW5 1226 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 FAM149AA5PLN7 773 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 ECE1P42892 770 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 ABCE1P61221 599 aaKnown RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 CRY1Q16526 586 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 Q3C1V9 767 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCF11-204ENST00000530660 EPGNQ6UW88 154 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 CCDC60Q8IWA6 550 aaPredicted RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 OSCP1Q8WVF1 389 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 SNX19Q92543 992 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 NACC1Q96RE7 527 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 GLT8D2Q9H1C3 349 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 TCF7L2Q9NQB0 619 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 WDR70Q9NW82 654 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 IPO11Q9UI26 975 aaKnown RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 C9IYK1 514 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 CYP3A4P08684 503 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 CDH1P12830 882 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 PLCL1Q15111 1095 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 LIN9Q5TKA1 542 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 STXBP4Q6ZWJ1 553 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 OSTM1Q86WC4 334 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 PLEKHA5Q9HAU0 1116 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
PCF11-204ENST00000530660 TSHRP16473 764 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 MYF6P23409 242 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 GTF2IP78347 998 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 GABPAQ06546 454 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 OR13F1Q8NGS4 319 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 RETREG1Q9H6L5 497 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 RMND5AQ9H871 391 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 HMG20AQ9NP66 347 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 ZNF358Q9NW07 568 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 MKS1Q9NXB0 559 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 TMEM9Q9P0T7 183 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
PCF11-204ENST00000530660 TRIM64A6NGJ6 449 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 CENPBD1B2RD01 187 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 PLIN3O60664 434 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 PARNO95453 639 aaKnown RBP14.4□□□□□ -0.11
PCF11-204ENST00000530660 TM4SF1P30408 202 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 YWHAZP63104 245 aaKnown RBP14.4□□□□□ -0.11
PCF11-204ENST00000530660 OGDHQ02218 1023 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 OCA2Q04671 838 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 AP3B2Q13367 1082 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 AQP6Q13520 282 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 UNC5BQ8IZJ1 945 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 XXYLT1Q8NBI6 393 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 SLC4A11Q8NBS3 891 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 FEZF2Q8TBJ5 459 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 MRPL47Q9HD33 250 aaKnown RBP14.4□□□□□ -0.11
PCF11-204ENST00000530660 WDR6Q9NNW5 1121 aaKnown RBP14.4□□□□□ -0.11
PCF11-204ENST00000530660 VPS28Q9UK41 221 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 UGT2A1Q9Y4X1 527 aa14.4□□□□□ -0.11
PCF11-204ENST00000530660 GLDCP23378 1020 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 EEF1B2P24534 225 aaKnown RBP14.39□□□□□ -0.11
PCF11-204ENST00000530660 ATP6V0D1P61421 351 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 TUBA1BP68363 451 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 GRSF1Q12849 480 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCF11-204ENST00000530660 SMU1Q2TAY7 513 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 PPP4R4Q6NUP7 873 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 TUBA1AQ71U36 451 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 APBA2Q99767 749 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 VRTNQ9H8Y1 702 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 RALBP11234 206 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 SERPINB1P30740 379 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 TMBIM6P55061 237 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 ECT2LQ008S8 904 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms