RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.69
COPB1-207ENST00000529866 AHCTF1Q8WYP5 2266 aa10.77□□□□□ -0.69
COPB1-207ENST00000529866 UBR5O95071 2799 aaPredicted RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 TULP2O00295 520 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 LZTS3O60299 673 aaPredicted RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 PIAS2O75928 621 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 PDIA4P13667 645 aaKnown RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 CD19P15391 556 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 NR2F2P24468 414 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 AKT2P31751 481 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 MLLT3P42568 568 aaPredicted RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 MXI1P50539 228 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 NDUFA8P51970 172 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 DAOAP59103 153 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 YWHAEP62258 255 aaKnown RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 SKOR1P84550 965 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.693e-14■■■□□ 17.4
COPB1-207ENST00000529866 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 POM121L1PQ3SYA9 428 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 MS4A13Q5J8X5 152 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 NADSYN1Q6IA69 706 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 XKR5Q6UX68 686 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 ATG14Q6ZNE5 492 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 MMS22LQ6ZRQ5 1243 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 LURAP1LQ8IV03 231 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 FAM186BQ8IYM0 893 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 ARL14Q8N4G2 192 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 IFI44Q8TCB0 444 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 KCTD13Q8WZ19 329 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 IRGQQ8WZA9 623 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 RPL10LQ96L21 214 aaKnown RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 APOLD1Q96LR9 279 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 SLC46A1Q96NT5 459 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 TRIM4Q9C037 500 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
COPB1-207ENST00000529866 OSBPL2Q9H1P3 480 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 UCKL1Q9NWZ5 548 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 SLCO3A1Q9UIG8 710 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 TRAF3IP3Q9Y228 551 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 UNC79Q9P2D8 2635 aa10.76□□□□□ -0.69
COPB1-207ENST00000529866 PLXNA2O75051 1894 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 SCAMP1O15126 338 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 STX10O60499 249 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 APOEP02649 317 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 LCP1P13796 627 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 CMA1P23946 247 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 RPL13P26373 211 aaKnown RBP10.75□□□□□ -0.69
COPB1-207ENST00000529866 PSMC2P35998 433 aaKnown RBP10.75□□□□□ -0.69
COPB1-207ENST00000529866 STK19P49842 368 aaPredicted RBP10.75□□□□□ -0.69
COPB1-207ENST00000529866 OXCT1P55809 520 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 HNRNPKP61978 463 aaKnown RBP eCLIP10.75□□□□□ -0.69
COPB1-207ENST00000529866 NUCB2P80303 420 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 NNTQ13423 1086 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 SLC12A1Q13621 1099 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 NFIL3Q16649 462 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 ZSCAN23Q3MJ62 389 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 DCAF6Q58WW2 860 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 FSCBQ5H9T9 825 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 AGBL4Q5VU57 503 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 ATL3Q6DD88 541 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 RBM44Q6ZP01 1051 aaKnown RBP10.75□□□□□ -0.69
COPB1-207ENST00000529866 FBXL13Q8NEE6 735 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 IFT43Q96FT9 208 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 CCNL2Q96S94 520 aaPredicted RBP10.75□□□□□ -0.69
COPB1-207ENST00000529866 MYOCQ99972 504 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 ARHGAP9Q9BRR9 750 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 CALN1Q9BXU9 219 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 RAB20Q9NX57 234 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 CFAP45Q9UL16 551 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 CA5BQ9Y2D0 317 aa10.75□□□□□ -0.69
COPB1-207ENST00000529866 COL12A1Q99715 3063 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 H3BM21 787 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 ALOX15BO15296 676 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 SLC31A1O15431 190 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 TCEA3O75764 348 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 FBXO21O94952 628 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 MOCS2O96007 188 aaPredicted RBP10.74□□□□□ -0.69
COPB1-207ENST00000529866 LTFP02788 710 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 SFTPCP11686 197 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 KRT10P13645 584 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 ZNF18P17022 549 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 HNRNPA2B1P22626 353 aaKnown RBP10.74□□□□□ -0.69
COPB1-207ENST00000529866 CNTN1Q12860 1018 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 ZCCHC8Q6NZY4 707 aaKnown RBP10.74□□□□□ -0.69
COPB1-207ENST00000529866 NEK5Q6P3R8 708 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 ZNF574Q6ZN55 896 aaPredicted RBP10.74□□□□□ -0.69
COPB1-207ENST00000529866 CHSY1Q86X52 802 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 CFAP52Q8N1V2 620 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 WDR36Q8NI36 951 aaKnown RBP10.74□□□□□ -0.69
COPB1-207ENST00000529866 UBA3Q8TBC4 463 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 FAM174AQ8TBP5 190 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 ATXN7L3BQ96GX2 97 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 FCRL2Q96LA5 508 aaPredicted RBP10.74□□□□□ -0.69
COPB1-207ENST00000529866 SPATA32Q96LK8 384 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 PPP1R9BQ96SB3 815 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
COPB1-207ENST00000529866 WDR70Q9NW82 654 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms