RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ADAMTS9Q9P2N4 1935 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 A0A1B0GTW7 788 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 MED19A0JLT2 244 aaPredicted RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TARSL2A2RTX5 802 aaKnown RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 LRRC72A6NJI9 287 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 LRRC53A6NM62 1247 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 E9PAM4 449 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TK2O00142 265 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 CBX4O00257 560 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 MID1O15344 667 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TEX33O43247 280 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TFE3P19532 575 aaPredicted RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 HOXD12P35452 270 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 GABRB2P47870 512 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 CXCR3P49682 368 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 RPS14P62263 151 aaKnown RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 ZBTB16Q05516 673 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 KLHL30Q0D2K2 578 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 NCAPHQ15003 741 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 CST6Q15828 149 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 PTPRNQ16849 979 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 CLEC16AQ2KHT3 1053 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 KLHL40Q2TBA0 621 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 HNRNPA1L2Q32P51 320 aaKnown RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 PPP1R2P3Q6NXS1 205 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 C14orf80Q86SX3 495 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 LUZP1Q86V48 1076 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 VPS36Q86VN1 386 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 SLC41A1Q8IVJ1 513 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 STK40Q8N2I9 435 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 MINDY1Q8N5J2 469 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 OR14C36Q8NHC7 312 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 FAM172AQ8WUF8 416 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TTC17Q96AE7 1141 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 MCEEQ96PE7 176 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 ZYG11BQ9C0D3 744 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 SGK2Q9HBY8 427 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 ATP13A1Q9HD20 1204 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 ARHGEF38Q9NXL2 777 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 USP36Q9P275 1121 aaKnown RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 EVLQ9UI08 416 aaPredicted RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 EIF2B4Q9UI10 523 aaKnown RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 SLCO3A1Q9UIG8 710 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 PILRBQ9UKJ0 227 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 INTS6Q9UL03 887 aaKnown RBP9.33□□□□□ -0.92
CMTM1-210ENST00000528441 HPCAL4Q9UM19 191 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 SCML1Q9UN30 329 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 PCDHB9Q9Y5E1 797 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3DA0A087WVF3 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3IA0A087WXS9 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3EA0A087X179 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3KA0A087X1G2 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3FA6NER0 549 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3LB9A6J9 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 BCAT2O15382 392 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 CREB3O43889 395 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 CNTN5O94779 1100 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ENDOD1O94919 500 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ADH1BP00325 375 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 SERPINF2P08697 491 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3HP0C7X1 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 CHRNB2P17787 502 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 MMP8P22894 467 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 PSMA2P25787 234 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 SLC8A1P32418 973 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ACSL1P33121 698 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 IRAK1P51617 712 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 LIMK1P53667 647 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 UBASH3AP57075 661 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 C21orf59P57076 290 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ENPP2Q13822 863 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ELAVL3Q14576 367 aaKnown RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 NFKBIBQ15653 356 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 DLG2Q15700 870 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ALFQ53S48 1182 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ACBD5Q5T8D3 534 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3GQ6DHY5 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3CQ6IPX1 549 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 DPY19L2P1Q6NXN4 242 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 SLC23A3Q6PIS1 610 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 Q6ZVU0 165 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 KIAA0907Q7Z7F0 614 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D3Q8IZP1 549 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 JOSD2Q8TAC2 188 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 CPLX3Q8WVH0 158 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 SKA1Q96BD8 255 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D31Q96DN5 1066 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 EPAS1Q99814 870 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 PRMT1Q99873 361 aaKnown RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 PABPC3Q9H361 631 aaKnown RBP9.32□□□□□ -0.92
CMTM1-210ENST00000528441 C6orf106Q9H6K1 298 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms