RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	WASHC2D	Q5SRD0	308 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CCNJ	Q5T5M9	372 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MAP3K21	Q5TCX8	1036 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KIAA1614	Q5VZ46	1190 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	EGFLAM	Q63HQ2	1017 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TIGD7	Q6NT04	549 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	METTL2B	Q6P1Q9	378 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LRRC8B	Q6P9F7	803 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DHRS4L2	Q6PKH6	230 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	C4orf22	Q6V702	233 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	B3GNT6	Q6ZMB0	384 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PPP1R21	Q6ZMI0	780 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KIF6	Q6ZMV9	814 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TBC1D1	Q86TI0	1168 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DDX53	Q86TM3	631 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LONP2	Q86WA8	852 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SFR1	Q86XK3	245 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MMAA	Q8IVH4	418 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	VSTM4	Q8IW00	320 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	IFT20	Q8IY31	132 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SLC38A6	Q8IZM9	456 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ST13P4	Q8IZP2	240 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ARHGAP24	Q8N264	748 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ELMOD1	Q8N336	334 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TCP11L2	Q8N4U5	519 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CPSF7	Q8N684	471 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	NATD1	Q8N6N6	113 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	C7orf31	Q8N865	590 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ENAH	Q8N8S7	591 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LILRB4	Q8NHJ6	448 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PYROXD1	Q8WU10	500 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SH3KBP1	Q96B97	665 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FAM149B1	Q96BN6	582 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PGBD1	Q96JS3	809 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ATP6V1G3	Q96LB4	118 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZSCAN31	Q96LW9	406 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RPRD1A	Q96P16	312 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	IMPG2	Q9BZV3	1241 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	API5	Q9BZZ5	524 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RAB17	Q9H0T7	212 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CDH19	Q9H159	772 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZSWIM4	Q9H7M6	989 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	IFT22	Q9H7X7	185 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CAAP1	Q9H8G2	361 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PLEKHA5	Q9HAU0	1116 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FANCE	Q9HB96	536 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PLGRKT	Q9HBL7	147 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZNF277	Q9NRM2	450 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PIH1D1	Q9NWS0	290 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	STK32B	Q9NY57	414 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CYP39A1	Q9NYL5	469 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	C9orf78	Q9NZ63	289 aa	Predicted RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	EHD2	Q9NZN4	543 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HACD3	Q9P035	362 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RNF181	Q9P0P0	153 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	IFNK	Q9P0W0	207 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KCNN3	Q9UGI6	736 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SLC12A6	Q9UHW9	1150 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HDAC9	Q9UKV0	1011 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LIMCH1	Q9UPQ0	1083 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ERVK-11	Q9UQG0	969 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MTMR6	Q9Y217	621 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PLAA	Q9Y263	795 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TMA7	Q9Y2S6	64 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PPP2R3B	Q9Y5P8	575 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SLC4A4	Q9Y6R1	1079 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MYH11	P35749	1972 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	C9orf84	Q5VXU9	1444 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ADGRL2	O95490	1459 aa		3.85	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KDM6B	O15054	1643 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TRAV6	A0A075B6T7	132 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	C17orf113	A0A1B0GUU1	675 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FUOM	A2VDF0	154 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	OR6C65	A6NJZ3	312 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CCDC85C	A6NKD9	419 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	GOLGA8R	I6L899	631 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ELL2	O00472	640 aa	Predicted RBP	3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	NDC80	O14777	642 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SLC22A1	O15245	554 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HDAC3	O15379	428 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	NCAM2	O15394	837 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RNMT	O43148	476 aa	Known RBP	3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	NCK2	O43639	380 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ORC4	O43929	436 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PEX11A	O75192	247 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	APOL3	O95236	402 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ECD	O95905	644 aa	Predicted RBP	3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CHEK2	O96017	543 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LYN	P07948	512 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MTHFD1	P11586	935 aa	Known RBP	3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PCNA	P12004	261 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FDXR	P22570	491 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MGAT1	P26572	445 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PPARG	P37231	505 aa	Predicted RBP	3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	UBA7	P41226	1012 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RXRG	P48443	463 aa		3.84	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PCYT1A	P49585	367 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms