RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 METTL12A8MUP2 240 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 FAM72CH0Y354 149 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 CDX4O14627 284 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 MID1O15344 667 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 CCP110O43303 1012 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 BNIP3LO60238 219 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SNAP91O60641 907 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 RNASEH1O60930 286 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 ENGP17813 658 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 OR1E1P30953 314 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 PSMD8P48556 350 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 LIMK1P53667 647 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 HDAC4P56524 1084 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 GSCP56915 257 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SULT2A1Q06520 285 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 KLHL30Q0D2K2 578 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 CST6Q15828 149 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 UAP1L1Q3KQV9 507 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 ARL13BQ3SXY8 428 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 FAM72AQ5TYM5 149 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 FAM72DQ6L9T8 149 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SLC23A3Q6PIS1 610 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 FAM72BQ86X60 149 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 PSMB7Q99436 277 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SPON2Q9BUD6 331 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 GTPBP2Q9BX10 602 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZYG11BQ9C0D3 744 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 PABPC3Q9H361 631 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 C6orf106Q9H6K1 298 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 FBXL12Q9NXK8 326 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 AIPL1Q9NZN9 384 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 OR12D3Q9UGF7 316 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SERGEFQ9UGK8 458 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 EVLQ9UI08 416 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 SLC6A14Q9UN76 642 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 A0A1W2PP55 124 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 FAM47DPA6NHR8 397 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.38e-12■■■■□ 21.2
TRAPPC4-205ENST00000525079 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 MT-CO1P00395 513 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 SERPINF2P08697 491 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 GLDCP23378 1020 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 SLC8A1P32418 973 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 PBX1P40424 430 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 DPP6P42658 865 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 OGDHQ02218 1023 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZBTB16Q05516 673 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 ARID5BQ14865 1188 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 DLG2Q15700 870 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 RWDD4Q6NW29 188 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 DCUN1D2Q6PH85 259 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 LRSAM1Q6UWE0 723 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 LINGO4Q6UY18 593 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 PYROXD2Q8N2H3 581 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 CADM4Q8NFZ8 388 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 OR2I1PQ8NGU4 316 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 CEP76Q8TAP6 659 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 FRS2Q8WU20 508 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 SNX19Q92543 992 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 BTBD1Q9H0C5 482 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 TMEM9BQ9NQ34 198 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 EIF2B4Q9UI10 523 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 VPS51Q9UID3 782 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 NCKAP1Q9Y2A7 1128 aa13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-205ENST00000525079 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 K7ERQ8 282 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 PLK4O00444 970 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 TM4SF5O14894 197 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 ATP9BO43861 1147 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 RNASEH2AO75792 299 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 FSBPO95073 299 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 SEMA4FO95754 770 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 IL1BP01584 269 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 FTLP02792 175 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 C7P10643 843 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 SRCP12931 536 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 HOXD12P35452 270 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 PRKCIP41743 596 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZNF143P52747 638 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 METAP1P53582 386 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 KRT83P78385 493 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 POM121L1PQ3SYA9 428 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms