RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ELSPBP1Q96BH3 223 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 MUC3BQ9H195 1237 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 HPS4Q9NQG7 708 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 GOLGA6AQ9NYA3 693 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 TBC1D14Q9P2M4 693 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 STOML2Q9UJZ1 356 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 IGLV3-10A0A075B6K4 115 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 F5H423 210 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 CORO7P57737 925 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 COPS2P61201 443 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 GUCY2DQ02846 1103 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ZNF177Q13360 481 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 IL31Q6EBC2 164 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SFTPA1Q8IWL2 248 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 RASGEF1CQ8N431 466 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 RUBCNQ92622 972 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 AZIN2Q96A70 460 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 FAF2Q96CS3 445 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 DDX50Q9BQ39 737 aaKnown RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 TMEM121Q9BTD3 319 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SLC39A8Q9C0K1 460 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ECT2Q9H8V3 914 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ABCB8Q9NUT2 735 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ZNF510Q9Y2H8 683 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 WDR87Q6ZQQ6 2873 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 TCAF2A6NFQ2 919 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 DRGXA6NNA5 263 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SOBPA7XYQ1 873 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ANKRD65E5RJM6 399 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SHOX2O60902 331 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ADH5P11766 374 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 CD70P32970 193 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SLC6A11P48066 632 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 FCHO2Q0JRZ9 810 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 AP1B1Q10567 949 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 TFDP2Q14188 446 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SIX1Q15475 284 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 PPP2R5EQ16537 467 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 MPPE1Q53F39 396 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SLC9A4Q6AI14 798 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 HJURPQ8NCD3 748 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 ACTRT1Q8TDG2 376 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 HMCESQ96FZ2 354 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 KLC2Q9H0B6 622 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 NOL6Q9H6R4 1146 aaKnown RBP12.68□□□□□ -0.38
PABPC1-219ENST00000522387 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 EPS15L1Q9UBC2 864 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 TTLL3Q9Y4R7 772 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 FRYLO94915 3013 aa12.68□□□□□ -0.38
PABPC1-219ENST00000522387 H7C0C1 242 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 KCNK1O00180 336 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CBX4O00257 560 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RAD51CO43502 376 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RHOCP08134 193 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RHOQP17081 205 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CD72P21854 359 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 HLA-FP30511 346 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 ATP5OP48047 213 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RUNX3Q13761 415 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 POLD3Q15054 466 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 TAZQ16635 292 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RNF219Q5W0B1 726 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CXorf57Q6NSI4 855 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 LINGO4Q6UY18 593 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 BBS12Q6ZW61 710 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 MTSS1LQ765P7 747 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 APCDD1Q8J025 514 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 SLC44A3Q8N4M1 653 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 PRELID2Q8N945 189 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 ATP2A3Q93084 1043 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 HEBP1Q9NRV9 189 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 TMEM248Q9NWD8 314 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 PPARGC1AQ9UBK2 798 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 NFU1Q9UMS0 254 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 NCOR1O75376 2440 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 J3KR12 359 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 APOC4-APOC2K7ER74 178 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 SLC9A3R1O14745 358 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 FGF10O15520 208 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RAMP2O60895 175 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CLDN11O75508 207 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 APOC2P02655 101 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CSKP41240 450 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 PAPOLAP51003 745 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CDH4P55283 916 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms