RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 PDE2AO00408 941 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 SERPINF2P08697 491 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 ATP6V1B2P21281 511 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 RAB15P59190 212 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 NCALDP61601 193 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 FSTL1Q12841 308 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 MTM1Q13496 603 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 ACAP1Q15027 740 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 NTRK3Q16288 839 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 ATG14Q6ZNE5 492 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CD99L2Q8TCZ2 262 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 THAP2Q9H0W7 228 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CD274Q9NZQ7 290 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 IFRD1O00458 451 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 SEPT4O43236 478 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CAPN15O75808 1086 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 RGS20O76081 388 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 PTPN3P26045 913 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CCL23P55773 120 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 EPS8Q12929 822 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 C1DQ13901 141 aaKnown RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 SEZ6Q53EL9 994 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 LACTB2Q53H82 288 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 C18orf25Q96B23 403 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CDH9Q9ULB4 789 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 PCP4L1A6NKN8 68 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 FAM86B1E9PN63 330 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 PCDH8O95206 1070 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 RPN2P04844 631 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 POLR2EP19388 210 aaKnown RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 APLP1P51693 650 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 DLG4P78352 724 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 PKN1Q16512 942 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 SPDYAQ5MJ70 313 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 RNF220Q5VTB9 566 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 SNX31Q8N9S9 440 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CLPBQ9H078 707 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 KCNK4Q9NYG8 393 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CHKBQ9Y259 395 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 SLC45A1Q9Y2W3 748 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ASGR1P07306 291 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ALADP13716 330 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 FAM83EQ2M2I3 478 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 AAGABQ6PD74 315 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CAMK1DQ8IU85 385 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 AMER2Q8N7J2 671 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF669Q96BR6 464 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 MTMR8Q96EF0 704 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 C2orf49Q9BVC5 232 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 COPS7BQ9H9Q2 264 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ABCC13Q9NSE7 274 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 THAP1Q9NVV9 213 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ARMCX1Q9P291 453 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 VPS51Q9UID3 782 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 AP4E1Q9UPM8 1137 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ATRNO75882 1429 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CYP3A7-CYP3A51PA0A087WV96 503 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 SEC24AO95486 1093 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 TCF3P15923 654 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CYP3A7P24462 503 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 AKAP5P24588 427 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 LRRC74AQ0VAA2 488 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 HECTD3Q5T447 861 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 AKAP14Q86UN6 197 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 FBXW8Q8N3Y1 598 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.41
PCDHGA6-201ENST00000517434 SEMA3DO95025 777 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCNA2P20248 432 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 ITGA1P56199 1179 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 USP46P62068 366 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 TIMM50Q3ZCQ8 353 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 HPS1Q92902 700 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 B3GALT6Q96L58 329 aa12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 MRPS17Q9Y2R5 130 aaKnown RBP12.46□□□□□ -0.42
PCDHGA6-201ENST00000517434 SYNDIG1LA6NDD5 238 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 HSMCR30P0CW71 290 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 CPA3P15088 417 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 RRM1P23921 792 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PON1P27169 355 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 MAPK10P53779 464 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 NFYCQ13952 458 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms