RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
PFDN1-206ENST00000514611 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
PFDN1-206ENST00000514611 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
PFDN1-206ENST00000514611 SAMSN1Q9NSI8 373 aaKnown RBP13.7□□□□□ -0.22
PFDN1-206ENST00000514611 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
PFDN1-206ENST00000514611 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
PFDN1-206ENST00000514611 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
PFDN1-206ENST00000514611 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 SRRM3A6NNA2 597 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 CNTN5O94779 1100 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 ATXN1LP0C7T5 689 aaKnown RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 GOT1P17174 413 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 ERCC5P28715 1186 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 NNMTP40261 264 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 C21orf59P57076 290 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 ALFQ53S48 1182 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 PRAMEF14Q5SWL7 426 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 FAM102AQ5T9C2 384 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 Q6ZVU0 165 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 NOP9Q86U38 636 aaKnown RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 TBCBQ99426 244 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 FEM1AQ9BSK4 669 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 NAA15Q9BXJ9 866 aaKnown RBP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 AASDHPPTQ9NRN7 309 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 ARHGEF38Q9NXL2 777 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
PFDN1-206ENST00000514611 DACH1Q9UI36 760 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 SLC25A13Q9UJS0 675 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 VPS28Q9UK41 221 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 OR51B4Q9Y5P0 310 aa13.69□□□□□ -0.22
PFDN1-206ENST00000514611 TMEM131Q92545 1883 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 DMXL2Q8TDJ6 3036 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
PFDN1-206ENST00000514611 F8VZ95 297 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 VILLO15195 856 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 ATP9BO43861 1147 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 BNIP3LO60238 219 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 SNAP91O60641 907 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 RTN2O75298 545 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 CLDN11O75508 207 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 UCHL3P15374 230 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 FLT3P36888 993 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 GRK6P43250 576 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 CDH4P55283 916 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 OXCT1P55809 520 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 SCAPQ12770 1279 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
PFDN1-206ENST00000514611 SUZ12Q15022 739 aaKnown RBP13.68□□□□□ -0.22
PFDN1-206ENST00000514611 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 TRNP1Q6NT89 227 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.68□□□□□ -0.22
PFDN1-206ENST00000514611 XYLT1Q86Y38 959 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 ZDHHC17Q8IUH5 632 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 ZNF683Q8IZ20 524 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 SH2D3CQ8N5H7 860 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 OR8D1Q8WZ84 308 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 FAM131CQ96AQ9 280 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 PSMB7Q99436 277 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 TAB2Q9NYJ8 693 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D30Q9Y2I9 924 aa13.68□□□□□ -0.22
PFDN1-206ENST00000514611 A0A1B0GTQ1 180 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 A0A1W2PR77 199 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 GOLGA8SH3BPF8 625 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 TAF4O00268 1085 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 DKK1O94907 266 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 MT-CO1P00395 513 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 CAPNS1P04632 268 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 RHOCP08134 193 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 MMEP08473 750 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 SRCP12931 536 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 CD38P28907 300 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 MAT2AP31153 395 aaKnown RBP13.67□□□□□ -0.22
PFDN1-206ENST00000514611 GABRB2P47870 512 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 CXCR3P49682 368 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 KLK7P49862 253 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-206ENST00000514611 CCR5P51681 352 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 SNX16P57768 344 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 BPIFB4P59827 614 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 DEUP1Q05D60 604 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 MTA1Q13330 715 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 SHBQ15464 509 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 DLG2Q15700 870 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 TCP11X2Q5H9J9 407 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 BRMS1LQ5PSV4 323 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 AGBL4Q5VU57 503 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 SMYD5Q6GMV2 418 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 LRSAM1Q6UWE0 723 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms