RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SLC9C2Q5TAH2 1124 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 KIAA1614Q5VZ46 1190 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 SLC18B1Q6NT16 456 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 KLBQ86Z14 1044 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 DNAJC10Q8IXB1 793 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM47BQ8NA70 645 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 TAOK3Q9H2K8 898 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 SLC13A4Q9UKG4 626 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 SH2D7A6NKC9 451 aaPredicted RBP5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 CELA2AP08217 269 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 SLC12A2P55011 1212 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 NR1H2P55055 460 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 G3BP1Q13283 466 aaKnown RBP eCLIP5.61□□□□□ -1.511e-12■■□□□ 11.6
HMGCS1-207ENST00000514610 TDGQ13569 410 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 STIM1Q13586 685 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 IL13RA2Q14627 380 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 SLC9C1Q4G0N8 1177 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 PAF1Q8N7H5 531 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 NAXEQ8NCW5 288 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 BCAS4Q8TDM0 211 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 ZBTB10Q96DT7 871 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 CRAMP1Q96RY5 1269 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 AGXT2Q9BYV1 514 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 SEMA4CQ9C0C4 833 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 LMAN2LQ9H0V9 348 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 TNFSF13BQ9Y275 285 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 FRMD4BQ9Y2L6 1034 aa5.61□□□□□ -1.51
HMGCS1-207ENST00000514610 J3KRW8 73 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 MSI1O43347 362 aaKnown RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 UGDHO60701 494 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 NEURL1O76050 574 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 NFATC1O95644 943 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 CD63P08962 238 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 ATP1A3P13637 1013 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 XBP1P17861 261 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 HOXD9P28356 352 aaPredicted RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 PSMC2P35998 433 aaKnown RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 PTPN9P43378 593 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 GHRHRQ02643 423 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 GALNT2Q10471 571 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 GJB7Q6PEY0 223 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 SLC2A7Q6PXP3 512 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM57BQ71RH2 274 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 UBE2Q1Q7Z7E8 422 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 NEK8Q86SG6 692 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 CNGA4Q8IV77 575 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 ADGRF4Q8IZF3 695 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 SCAIQ8N9R8 606 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 SETD9Q8NE22 299 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 ST8SIA4Q92187 359 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 ELP4Q96EB1 424 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 RRP36Q96EU6 259 aaKnown RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 SIGLEC11Q96RL6 698 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 NAP1L4Q99733 375 aaKnown RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 ZNF304Q9HCX3 659 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 TMEM184CQ9NVA4 438 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 ZNF69Q9UC07 566 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 IPO11Q9UI26 975 aaKnown RBP5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 UTS2RQ9UKP6 389 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 SLC8A2Q9UPR5 921 aa5.6□□□□□ -1.51
HMGCS1-207ENST00000514610 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 KCNU1A8MYU2 1149 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 E5RJQ4 531 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 ADAM10O14672 748 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 CCNT1O60563 726 aaKnown RBP5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 USP12O75317 370 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 CTSAP10619 480 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 FCGR2AP12318 317 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 GJC1P36383 396 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 PGM1P36871 562 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 STAT1P42224 750 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 CPA2P48052 419 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 SRSF4Q08170 494 aaKnown RBP5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 GOLGA8FQ08AF8 430 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 TBL3Q12788 808 aaKnown RBP5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 TBX2Q13207 712 aaPredicted RBP5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 GALNT3Q14435 633 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 FBXO43Q4G163 708 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 MIDNQ504T8 468 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 VWA5B1Q5TIE3 1220 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 LRIG3Q6UXM1 1119 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 LRRC8DQ7L1W4 858 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 NCSTNQ92542 709 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 CADM1Q9BY67 442 aaKnown RBP5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 PRSS22Q9GZN4 317 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 TBX20Q9UMR3 447 aa5.59□□□□□ -1.51
HMGCS1-207ENST00000514610 SH3BP5O60239 455 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 IFIT1P09914 478 aaKnown RBP5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 PRR35P0CG20 571 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 CD53P19397 219 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 PRKCHP24723 683 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 GGT5P36269 586 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 RPS13P62277 151 aaKnown RBP5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF91Q05481 1191 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms